RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 A6NHS1 94 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 AHCYL1O43865 530 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 MAP3K6O95382 1288 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 C1QAP02745 245 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ATP6V1B1P15313 513 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SSTR1P30872 391 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 NRLP54845 237 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 EIF3EP60228 445 aaKnown RBP11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 NKX3-2P78367 333 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ROR2Q01974 943 aaKnown RBP11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 GAD2Q05329 585 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 TMEM132AQ24JP5 1023 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 FAM102AQ5T9C2 384 aaPredicted RBP11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ANKRD52Q8NB46 1076 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 RSAD2Q8WXG1 361 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 NT5C3BQ969T7 300 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 NME7Q9Y5B8 376 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 B2RBV5 119 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 GCATO75600 419 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PGM1P36871 562 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PDIA2Q13087 525 aaKnown RBP11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 TTLL12Q14166 644 aaPredicted RBP11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 EML3Q32P44 896 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 FNBP1LQ5T0N5 605 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 STRADAQ7RTN6 431 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 OTOAQ7RTW8 1153 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 TTC30AQ86WT1 665 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 UNC45BQ8IWX7 931 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PQLC3Q8N755 202 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PLD5Q8N7P1 536 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 CEP70Q8NHQ1 597 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 KIF12Q96FN5 646 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SYT17Q9BSW7 474 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SYNCQ9H7C4 482 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 GRID1Q9ULK0 1009 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 DCAF8L1A6NGE4 600 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 E5RJQ4 531 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 HNRNPRO43390 633 aaKnown RBP11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 GABBR2O75899 941 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 RTN3O95197 1032 aaPredicted RBP11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 CD48P09326 243 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ZNF286BP0CG31 522 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 DESP17661 470 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 WARSP23381 471 aaKnown RBP11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 LRPAP1P30533 357 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 VHLP40337 213 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ROR1Q01973 937 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SLC18A2Q05940 514 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ZBTB46Q86UZ6 589 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 AGGF1Q8N302 714 aaeCLIP11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 OR6J1Q8NGC5 347 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SHKBP1Q8TBC3 707 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PIP4K2CQ8TBX8 421 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 DCAKDQ8WVC6 231 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 NRG4Q8WWG1 115 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 KCTD13Q8WZ19 329 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ZMAT2Q96NC0 199 aaKnown RBP11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 MIPEPQ99797 713 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 GORASP1Q9BQQ3 440 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 CADM1Q9BY67 442 aaKnown RBP11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ZWILCHQ9H900 591 aa11.23□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 XPOTO43592 962 aaKnown RBP11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 TROVE2P10155 538 aaKnown RBP eCLIP11.22□□□□□ -0.614e-6■■□□□ 11.8
SENP3-EIF4A1-201ENST00000614237 PDGFRAP16234 1089 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 TPSB2P20231 275 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ALDH18A1P54886 795 aaKnown RBP11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 TPSAB1Q15661 275 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 GOLGA7BQ2TAP0 167 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PPP1R26Q5T8A7 1209 aaPredicted RBP11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PMF1Q6P1K2 205 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 LRRC74BQ6ZQY2 392 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ZNF276Q8N554 614 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 TOP6BLQ8N6T0 577 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 POU5F2Q8N7G0 328 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SLC7A6OSQ96CW6 309 aaPredicted RBP11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SLC13A1Q9BZW2 595 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PCDH18Q9HCL0 1135 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SLC17A7Q9P2U7 560 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 NUMBLQ9Y6R0 609 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 HACD1B0YJ81 288 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PRPSAP2O60256 369 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 TRPA1O75762 1119 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 OR6B1O95007 311 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 FESP07332 822 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 DHRS4L1P0CG22 281 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 T-ENOLP0DO92 83 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 CCNB1P14635 433 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 YARSP54577 528 aaKnown RBP11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 AIF1P55008 147 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 BST2Q10589 180 aaKnown RBP11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 FOXB2Q5VYV0 432 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ASRGL1Q7L266 308 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 ALYREFQ86V81 257 aaKnown RBP11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 RFX6Q8HWS3 928 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PDIK1LQ8N165 341 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 EMC1Q8N766 993 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 FBXO27Q8NI29 283 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 SPATA18Q8TC71 538 aa11.22□□□□□ -0.61
SENP3-EIF4A1-201ENST00000614237 PYDC1Q8WXC3 89 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms