RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 ALDH7A1P49419 539 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 PRAMEP78395 509 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 NOGQ13253 232 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 MPP3Q13368 585 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 TMC5Q6UXY8 1006 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 NUDT18Q6ZVK8 323 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 GET4Q7L5D6 327 aaPredicted RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 UNC45BQ8IWX7 931 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 LRRC39Q96DD0 335 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ZBTB45Q96K62 511 aaPredicted RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 FAM161BQ96MY7 647 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 SMYD2Q9NRG4 433 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 STK39Q9UEW8 545 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 FBXO9Q9UK97 447 aaPredicted RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ZNF536O15090 1300 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 CCDC189A1A4V9 331 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 SOWAHBA6NEL2 793 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 BTBD19C9JJ37 291 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ADCY6O43306 1168 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 NOL4O94818 638 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 PARNO95453 639 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 MOCS2O96007 188 aaPredicted RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 KRT6AP02538 564 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 KRT6BP04259 564 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ATP5BP06576 529 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 OCM2P0CE71 109 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 OCMP0CE72 109 aaPredicted RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 TYK2P29597 1187 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 NOMO3P69849 1222 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 SMARCB1Q12824 385 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 IRF5Q13568 498 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 HGSNATQ68CP4 663 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 SIAH1Q8IUQ4 282 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 PDZD8Q8NEN9 1154 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 SIK2Q9H0K1 926 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 CACYBPQ9HB71 228 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 TBC1D13Q9NVG8 400 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ZNF180Q9UJW8 692 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 GRID1Q9ULK0 1009 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 RIPK3Q9Y572 518 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 HNRNPRO43390 633 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 SNX2O60749 519 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 APRTP07741 180 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 GLI1P08151 1106 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ABHD2P08910 425 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 POLR2EP19388 210 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 SCNN1BP51168 640 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 FAM187BQ17R55 369 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ITIH5Q86UX2 942 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 LRRC49Q8IUZ0 686 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ANKMY2Q8IV38 441 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ZFRQ96KR1 1074 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 SERPINB11Q96P15 392 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 TLR8Q9NR97 1041 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 MTO1Q9Y2Z2 717 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 COQ4Q9Y3A0 265 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 SDR42E2A6NKP2 422 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 EPHB6O15197 1021 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 TM9SF1O15321 606 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 SH3BP5O60239 455 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 CYP2F1P24903 491 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 HMOX2P30519 316 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 SERPINB10P48595 397 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 TKTL1P51854 596 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 GHRHRQ02643 423 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 SLC5A9Q2M3M2 681 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 ZNF572Q7Z3I7 529 aaPredicted RBP8.97□□□□□ -0.97
PDE6A-204ENST00000613228 MAML1Q92585 1016 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 MAGEB18Q96M61 343 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 SEPT5Q99719 369 aaPredicted RBP8.97□□□□□ -0.97
PDE6A-204ENST00000613228 VPS11Q9H270 941 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 DPP7Q9UHL4 492 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 L3MBTL1Q9Y468 752 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 KPNA4O00629 521 aaPredicted RBP8.97□□□□□ -0.97
PDE6A-204ENST00000613228 HSPA13P48723 471 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 ST13P50502 369 aaKnown RBP8.97□□□□□ -0.97
PDE6A-204ENST00000613228 GSTA3Q16772 222 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 C3orf62Q6ZUJ4 267 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 EFL1Q7Z2Z2 1120 aaKnown RBP8.97□□□□□ -0.97
PDE6A-204ENST00000613228 HORMAD1Q86X24 394 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 NLGN2Q8NFZ4 835 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 ZBED3Q96IU2 234 aaPredicted RBP8.97□□□□□ -0.97
PDE6A-204ENST00000613228 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.97□□□□□ -0.97
PDE6A-204ENST00000613228 LRRC40Q9H9A6 602 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 POPDC2Q9HBU9 364 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 HMX1Q9NP08 348 aaPredicted RBP8.97□□□□□ -0.97
PDE6A-204ENST00000613228 DDIT4Q9NX09 232 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 DCDC2Q9UHG0 476 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 RABGEF1Q9UJ41 708 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 MYH2Q9UKX2 1941 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 SHOX2O60902 331 aaPredicted RBP8.97□□□□□ -0.97
PDE6A-204ENST00000613228 CAPN1P07384 714 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 YWHAZP63104 245 aaKnown RBP8.97□□□□□ -0.97
PDE6A-204ENST00000613228 SLC29A2Q14542 456 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 LONRF1Q17RB8 773 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 CTXN3Q4LDR2 81 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 GLRA4Q5JXX5 417 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 FRA10AC1Q70Z53 315 aa8.97□□□□□ -0.97
PDE6A-204ENST00000613228 ZCCHC9Q8N567 271 aaKnown RBP8.97□□□□□ -0.97
PDE6A-204ENST00000613228 AGAP11Q8TF27 550 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms