RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ARSEP51690 589 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 NFIL3Q16649 462 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 MAP7D1Q3KQU3 841 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 TAF1BQ53T94 588 aaPredicted RBP11.2□□□□□ -0.62
FAM3A-221ENST00000612856 HGSNATQ68CP4 663 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 DAW1Q8N136 415 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 CARNMT1Q8N4J0 409 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 FAM13CQ8NE31 585 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.2□□□□□ -0.62
FAM3A-221ENST00000612856 IFT122Q9HBG6 1241 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 TRPM5Q9NZQ8 1165 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 DIS3Q9Y2L1 958 aaKnown RBP11.2□□□□□ -0.62
FAM3A-221ENST00000612856 CBX4O00257 560 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 PER2O15055 1255 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 DHX15O43143 795 aaKnown RBP11.2□□□□□ -0.62
FAM3A-221ENST00000612856 HCRTO43612 131 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 CXCL14O95715 111 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 CYBBP04839 570 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 CSF2RAP15509 400 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 USP46P62068 366 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 GTF2BQ00403 316 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 TBC1D25Q3MII6 688 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 MTDHQ86UE4 582 aaKnown RBP11.2□□□□□ -0.62
FAM3A-221ENST00000612856 RASSF3Q86WH2 238 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 PPM1NQ8N819 430 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 IPMKQ8NFU5 416 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 DTNBP1Q96EV8 351 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 MBOAT7Q96N66 472 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 KLF6Q99612 283 aaPredicted RBP11.2□□□□□ -0.62
FAM3A-221ENST00000612856 PHACTR1Q9C0D0 580 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 DCLRE1BQ9H816 532 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 ADGRA3Q8IWK6 1321 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 C5orf60A6NFR6 353 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 EEF2KO00418 725 aaKnown RBP11.19□□□□□ -0.62
FAM3A-221ENST00000612856 CABYRO75952 493 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 UNC5CO95185 931 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 SELPP16109 830 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 KDSRQ06136 332 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 NXNQ6DKJ4 435 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 PRSS55Q6UWB4 352 aaPredicted RBP11.19□□□□□ -0.62
FAM3A-221ENST00000612856 TNS4Q8IZW8 715 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 AGR3Q8TD06 166 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 TMC2Q8TDI7 906 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 SREK1Q8WXA9 508 aaKnown RBP11.19□□□□□ -0.62
FAM3A-221ENST00000612856 ING5Q8WYH8 240 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 MAML1Q92585 1016 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 ZNF558Q96NG5 402 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 HTATIP2Q9BUP3 242 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 DHX33Q9H6R0 707 aaKnown RBP11.19□□□□□ -0.62
FAM3A-221ENST00000612856 DNAAF2Q9NVR5 837 aaKnown RBP11.19□□□□□ -0.62
FAM3A-221ENST00000612856 FLRT1Q9NZU1 646 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 WDR35Q9P2L0 1181 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 LRCH1Q9Y2L9 728 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 TPD52L2O43399 206 aaKnown RBP11.19□□□□□ -0.62
FAM3A-221ENST00000612856 FGBP02675 491 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 GJA1P17302 382 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 POU5F1BQ06416 359 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 KPNB1Q14974 876 aaKnown RBP11.19□□□□□ -0.62
FAM3A-221ENST00000612856 FIGNQ5HY92 759 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 C1orf146Q5VVC0 180 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 IZUMO2Q6UXV1 221 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 CTU1Q7Z7A3 348 aaKnown RBP11.19□□□□□ -0.62
FAM3A-221ENST00000612856 ARHGAP24Q8N264 748 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 TPCN2Q8NHX9 752 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 FEZF2Q8TBJ5 459 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 DEPDC1BQ8WUY9 529 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 CRYGNQ8WXF5 182 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 ATP6V1E2Q96A05 226 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 MPP4Q96JB8 637 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 OSBPL8Q9BZF1 889 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 GANQ9H2C0 597 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 BDP1A6H8Y1 2624 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 HAUS5O94927 633 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 CYP2F1P24903 491 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 PGM1P36871 562 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 BNIP1Q12981 228 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 KCTD21Q4G0X4 260 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 DENND1BQ6P3S1 775 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 TMC5Q6UXY8 1006 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 TAS2R42Q7RTR8 314 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 FAM71DQ8N9W8 422 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 DNAJC1Q96KC8 554 aaKnown RBP11.19□□□□□ -0.62
FAM3A-221ENST00000612856 CFAP57Q96MR6 1250 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 ZNF317Q96PQ6 595 aaPredicted RBP11.19□□□□□ -0.62
FAM3A-221ENST00000612856 BARX2Q9UMQ3 279 aaPredicted RBP11.19□□□□□ -0.62
FAM3A-221ENST00000612856 PHTF1Q9UMS5 762 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 TNFSF13BQ9Y275 285 aa11.19□□□□□ -0.62
FAM3A-221ENST00000612856 MEIS3P2A8K0S8 358 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 ATP5HO75947 161 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 GPD1P21695 349 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 PSMD6Q15008 389 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 EXOC3L1Q86VI1 746 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 DEFB106AQ8N104 65 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 NAT16Q8N8M0 369 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 MS4A4AQ96JQ5 239 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 ASB7Q9H672 318 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 NUMA1Q14980 2115 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 CITO14578 2027 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 SRRM3A6NNA2 597 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms