RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 C3orf70A6NLC5 250 aaPredicted RBP18.22■□□□□ 0.51
SREK1-216ENST00000612404 XYLBO75191 536 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 SLU7O95391 586 aaKnown RBP18.22■□□□□ 0.51
SREK1-216ENST00000612404 HNRNPA1P09651 372 aaKnown RBP eCLIP18.22■□□□□ 0.51
SREK1-216ENST00000612404 CTAGE8P0CG41 777 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 KRT10P13645 584 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 CCR1P32246 355 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 GTF2F1P35269 517 aaKnown RBP eCLIP18.22■□□□□ 0.51
SREK1-216ENST00000612404 TBX4P57082 545 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 COPS2P61201 443 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 EIF4EBP2Q13542 120 aaPredicted RBP18.22■□□□□ 0.51
SREK1-216ENST00000612404 TFDP3Q5H9I0 405 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 CTAGE6Q86UF2 777 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 SLC13A5Q86YT5 568 aaPredicted RBP18.22■□□□□ 0.51
SREK1-216ENST00000612404 TMC8Q8IU68 726 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 CTAGE4Q8IX94 777 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 PYROXD2Q8N2H3 581 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 LRRN4CLQ8ND94 238 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 AP1M1Q9BXS5 423 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 ANLNQ9NQW6 1124 aa18.22■□□□□ 0.51
SREK1-216ENST00000612404 COCHO43405 550 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 HMBSP08397 361 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 HOXA9P31269 272 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 L1CAMP32004 1257 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 CDKN2BP42772 138 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 AIF1P55008 147 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 PDK2Q15119 407 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 CLUL1Q15846 466 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 GAREM2Q75VX8 874 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 NTAN1Q96AB6 310 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 GCNAQ96QF7 691 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 LRRC3Q9BY71 257 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 ATXN3LQ9H3M9 355 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 PCDH18Q9HCL0 1135 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 ZDHHC7Q9NXF8 308 aa18.21■□□□□ 0.51
SREK1-216ENST00000612404 COLQQ9Y215 455 aaPredicted RBP18.21■□□□□ 0.51
SREK1-216ENST00000612404 CCDC195A0A1B0GUA6 201 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 TCRBV7S2A1N4TA0A589 114 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 KRIT1O00522 736 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 MOCS2O96007 188 aaPredicted RBP18.2■□□□□ 0.5
SREK1-216ENST00000612404 PTPN2P17706 415 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 TUBP50607 506 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 CYP4F8P98187 520 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 MMRN1Q13201 1228 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 DPYSL3Q14195 570 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 TRIP4Q15650 581 aaPredicted RBP18.2■□□□□ 0.5
SREK1-216ENST00000612404 DPYSL2Q16555 572 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 LRIT3Q3SXY7 679 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 BRMS1LQ5PSV4 323 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 PSTKQ8IV42 348 aaKnown RBP18.2■□□□□ 0.5
SREK1-216ENST00000612404 ZNF276Q8N554 614 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 MRPS31Q92665 395 aaKnown RBP18.2■□□□□ 0.5
SREK1-216ENST00000612404 KCTD15Q96SI1 283 aaPredicted RBP18.2■□□□□ 0.5
SREK1-216ENST00000612404 HERPUD2Q9BSE4 406 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 hCG_1818297A0A087WSY0 165 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 A0A1W2PRU2 124 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 CDC25CP30307 473 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 ARSEP51690 589 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 C2orf54Q08AI8 447 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 PPP2R5DQ14738 602 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 TXNDC8Q6A555 127 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 SPATA4Q8NEY3 305 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 CDCA3Q99618 268 aaPredicted RBP18.2■□□□□ 0.5
SREK1-216ENST00000612404 MAK16Q9BXY0 300 aaKnown RBP18.2■□□□□ 0.5
SREK1-216ENST00000612404 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.2■□□□□ 0.5
SREK1-216ENST00000612404 DNMT3BQ9UBC3 853 aaKnown RBP18.2■□□□□ 0.5
SREK1-216ENST00000612404 ANAPC1Q9H1A4 1944 aa18.2■□□□□ 0.5
SREK1-216ENST00000612404 DOCK6Q96HP0 2047 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 I6L893 689 aaPredicted RBP18.19■□□□□ 0.5
SREK1-216ENST00000612404 OAS1P00973 400 aaKnown RBP18.19■□□□□ 0.5
SREK1-216ENST00000612404 SLC2A3P11169 496 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 GJA1P17302 382 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 SCAPQ12770 1279 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 NNTQ13423 1086 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 PPP2R5EQ16537 467 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 KLHDC10Q6PID8 442 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 PDZD4Q76G19 769 aaPredicted RBP18.19■□□□□ 0.5
SREK1-216ENST00000612404 RFX6Q8HWS3 928 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 C12orf76Q8N812 135 aaPredicted RBP18.19■□□□□ 0.5
SREK1-216ENST00000612404 VN1R2Q8NFZ6 395 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 FCRL2Q96LA5 508 aaPredicted RBP18.19■□□□□ 0.5
SREK1-216ENST00000612404 PRKD2Q9BZL6 878 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 RNF38Q9H0F5 515 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 NSUN3Q9H649 340 aaKnown RBP18.19■□□□□ 0.5
SREK1-216ENST00000612404 TMEM51Q9NW97 253 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 MTMR10Q9NXD2 777 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 ARHGEF38Q9NXL2 777 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 A0A1W2PPC1 479 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 CREB3O43889 395 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 APOEP02649 317 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 PTPN7P35236 360 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 KPNA1P52294 538 aaPredicted RBP18.19■□□□□ 0.5
SREK1-216ENST00000612404 DYNLT1P63172 113 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 ZNF572Q7Z3I7 529 aaPredicted RBP18.19■□□□□ 0.5
SREK1-216ENST00000612404 SLC39A13Q96H72 371 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 CYP2S1Q96SQ9 504 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 SIK2Q9H0K1 926 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 PRDM12Q9H4Q4 367 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 PIDD1Q9HB75 910 aa18.19■□□□□ 0.5
SREK1-216ENST00000612404 RBM12Q9NTZ6 932 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms