RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 TRUB2O95900 331 aaKnown RBP11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 ME2P23368 584 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 DNAJB2P25686 324 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 TGFB2P61812 414 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 TMEM62Q0P6H9 643 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 BST1Q10588 318 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 CDH17Q12864 832 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 ILF2Q12905 390 aaKnown RBP11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 ACCSLQ4AC99 568 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 SCARA3Q6AZY7 606 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 DDHD1Q8NEL9 900 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 VPS50Q96JG6 964 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 ST6GALNAC4Q9H4F1 302 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 C10orf88Q9H8K7 445 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 SSU72Q9NP77 194 aaKnown RBP11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 SAE1Q9UBE0 346 aaPredicted RBP11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 EFR3BQ9Y2G0 817 aa11.21□□□□□ -0.61
CDC42EP3-206ENST00000611976 UBDO15205 165 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 PMPCBO75439 489 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 PDE5AO76074 875 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 USP1O94782 785 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 APOA1P02647 267 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 SERPINA6P08185 405 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 ANPEPP15144 967 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 AMHR2Q16671 573 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 CCDC92Q53HC0 331 aaPredicted RBP11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 AAGABQ6PD74 315 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 KCNT2Q6UVM3 1135 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 ZBTB49Q6ZSB9 765 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 VSIG10LQ86VR7 867 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 KCNMB4Q86W47 210 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 ADGRF2Q8IZF7 708 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 FITM2Q8N6M3 262 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 FAM13CQ8NE31 585 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 OR9Q1Q8NGQ5 310 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 ZMAT2Q96NC0 199 aaKnown RBP11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 LRRC4CQ9HCJ2 640 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 CD274Q9NZQ7 290 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 ZNF229Q9UJW7 825 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 SCAF8Q9UPN6 1271 aaKnown RBP11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 ITGB5P18084 799 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 WASHC5Q12768 1159 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 MRNIPQ6NTE8 343 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 ARHGAP22Q7Z5H3 698 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 CCDC60Q8IWA6 550 aaPredicted RBP11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 SEMA4DQ92854 862 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 XPNPEP3Q9NQH7 507 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 CHST12Q9NRB3 414 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 TRHDEQ9UKU6 1024 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 SLC12A4Q9UP95 1085 aa11.21□□□□□ -0.62
CDC42EP3-206ENST00000611976 KCPQ6ZWJ8 1503 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 RNF103O00237 685 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 DCXO43602 365 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 CLASP2O75122 1294 aaKnown RBP11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 AP1G2O75843 785 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 PLEKHA7Q6IQ23 1121 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 PRMT9Q6P2P2 845 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 DHDDSQ86SQ9 333 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 TDRPQ86YL5 185 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 FAM162AQ96A26 154 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 TUBGCP3Q96CW5 907 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 CPB2Q96IY4 423 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 MPP4Q96JB8 637 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 CATSPER2Q96P56 530 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 ZDHHC18Q9NUE0 388 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 TCRBV7S2A1N4TA0A589 114 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 TMEM191CA6NGB0 347 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 TPP1O14773 563 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 RGS2P41220 211 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 NEK2P51955 445 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 ROR2Q01974 943 aaKnown RBP11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 RIPOR1Q6ZS17 1223 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 ZNF333Q96JL9 665 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 RUBCNLQ9H714 662 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 RHBDL2Q9NX52 303 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 ADAM28Q9UKQ2 775 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 A0A1W2PPM1 405 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 RHOBTB1O94844 696 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 SLC2A3P11169 496 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 CRABP2P29373 138 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 RPL7AP62424 266 aaKnown RBP11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 MAPRE1Q15691 268 aaKnown RBP11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 SLC44A4Q53GD3 710 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 GLRA4Q5JXX5 417 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 CLNKQ7Z7G1 428 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 PALB2Q86YC2 1186 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 HELQQ8TDG4 1101 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 PYDC1Q8WXC3 89 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 USP13Q92995 863 aaPredicted RBP11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 TMEM79Q9BSE2 394 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 C17orf80Q9BSJ5 609 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 SLC8A2Q9UPR5 921 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 USP20Q9Y2K6 914 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 A0A087WZ62 844 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 IGKV6D-41A0A0C4DH26 115 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 E5RJQ4 531 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 BANF1O75531 89 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 MAP3K10Q02779 954 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 SAMD7Q7Z3H4 446 aa11.2□□□□□ -0.62
CDC42EP3-206ENST00000611976 SNX32Q86XE0 403 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms