RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 FAM124BQ9H5Z6 455 aaPredicted RBP22.81■■□□□ 1.24
CBWD3-207ENST00000611426 CLIC5Q9NZA1 410 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.81■■□□□ 1.24
CBWD3-207ENST00000611426 MARK1Q9P0L2 795 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 STARD13Q9Y3M8 1113 aa22.81■■□□□ 1.24
CBWD3-207ENST00000611426 CNOT1A5YKK6 2376 aaKnown RBP22.8■■□□□ 1.24
CBWD3-207ENST00000611426 CACNG3O60359 315 aa22.8■■□□□ 1.24
CBWD3-207ENST00000611426 TPM2P07951 284 aa22.8■■□□□ 1.24
CBWD3-207ENST00000611426 PRKCSHP14314 528 aaPredicted RBP22.8■■□□□ 1.24
CBWD3-207ENST00000611426 P2RY2P41231 377 aa22.8■■□□□ 1.24
CBWD3-207ENST00000611426 DHPSP49366 369 aaPredicted RBP22.8■■□□□ 1.24
CBWD3-207ENST00000611426 SLC8A3P57103 927 aa22.8■■□□□ 1.24
CBWD3-207ENST00000611426 MAN2A1Q16706 1144 aa22.8■■□□□ 1.24
CBWD3-207ENST00000611426 RNF43Q68DV7 783 aa22.8■■□□□ 1.24
CBWD3-207ENST00000611426 ARHGAP17Q68EM7 881 aa22.8■■□□□ 1.24
CBWD3-207ENST00000611426 LRRC8AQ8IWT6 810 aa22.8■■□□□ 1.24
CBWD3-207ENST00000611426 SPACA7Q96KW9 195 aa22.8■■□□□ 1.24
CBWD3-207ENST00000611426 NUP205Q92621 2012 aa22.8■■□□□ 1.24
CBWD3-207ENST00000611426 TM4SF5O14894 197 aa22.79■■□□□ 1.24
CBWD3-207ENST00000611426 BYSLQ13895 437 aaKnown RBP22.79■■□□□ 1.24
CBWD3-207ENST00000611426 CYP2U1Q7Z449 544 aa22.79■■□□□ 1.24
CBWD3-207ENST00000611426 PIGZQ86VD9 579 aa22.79■■□□□ 1.24
CBWD3-207ENST00000611426 ANKRD52Q8NB46 1076 aa22.79■■□□□ 1.24
CBWD3-207ENST00000611426 ARMCX3Q9UH62 379 aaPredicted RBP22.79■■□□□ 1.24
CBWD3-207ENST00000611426 COQ4Q9Y3A0 265 aa22.79■■□□□ 1.24
CBWD3-207ENST00000611426 STC2O76061 302 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 NTSR1P30989 418 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 WASP42768 502 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 MTIF2P46199 727 aaKnown RBP22.78■■□□□ 1.24
CBWD3-207ENST00000611426 COG7P83436 770 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 EFEMP1Q12805 493 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 TRIM14Q14142 442 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 SDE2Q6IQ49 451 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 Q6ZNB5 142 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 LPCAT2Q7L5N7 544 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 TRIM59Q8IWR1 403 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 ARHGAP18Q8N392 663 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 FRMD1Q8N878 549 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 BHMTQ93088 406 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 ERGIC2Q96RQ1 377 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 EDEM2Q9BV94 578 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 VPS16Q9H269 839 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 RASAL2Q9UJF2 1139 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 HCN2Q9UL51 889 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 ZNF510Q9Y2H8 683 aa22.78■■□□□ 1.24
CBWD3-207ENST00000611426 KHNYNO15037 678 aaKnown RBP22.77■■□□□ 1.24
CBWD3-207ENST00000611426 HMBSP08397 361 aa22.77■■□□□ 1.24
CBWD3-207ENST00000611426 HOXB2P14652 356 aa22.77■■□□□ 1.24
CBWD3-207ENST00000611426 DGKGP49619 791 aa22.77■■□□□ 1.24
CBWD3-207ENST00000611426 CUL2Q13617 745 aa22.77■■□□□ 1.24
CBWD3-207ENST00000611426 MAP7D1Q3KQU3 841 aa22.77■■□□□ 1.24
CBWD3-207ENST00000611426 RAB41Q5JT25 222 aa22.77■■□□□ 1.24
CBWD3-207ENST00000611426 EGFLAMQ63HQ2 1017 aa22.77■■□□□ 1.24
CBWD3-207ENST00000611426 CHPFQ8IZ52 775 aa22.77■■□□□ 1.24
CBWD3-207ENST00000611426 PIGKQ92643 395 aa22.77■■□□□ 1.24
CBWD3-207ENST00000611426 IQCDQ96DY2 449 aa22.77■■□□□ 1.24
CBWD3-207ENST00000611426 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.77■■□□□ 1.24
CBWD3-207ENST00000611426 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 ZBTB24O43167 697 aaPredicted RBP22.76■■□□□ 1.23
CBWD3-207ENST00000611426 TKTL1P51854 596 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 YWHAEP62258 255 aaKnown RBP22.76■■□□□ 1.23
CBWD3-207ENST00000611426 VWA3BQ502W6 1294 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 TOGARAM2Q6ZUX3 1019 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 RSRC2Q7L4I2 434 aaKnown RBP22.76■■□□□ 1.23
CBWD3-207ENST00000611426 TMEFF1Q8IYR6 380 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 CNTNAP3BQ96NU0 1288 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 CNTNAP3Q9BZ76 1288 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 DCLK3Q9C098 648 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 METTL14Q9HCE5 456 aaKnown RBP22.76■■□□□ 1.23
CBWD3-207ENST00000611426 PLK2Q9NYY3 685 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 MBD1Q9UIS9 605 aaPredicted RBP22.76■■□□□ 1.23
CBWD3-207ENST00000611426 TPRP12270 2363 aaKnown RBP22.76■■□□□ 1.23
CBWD3-207ENST00000611426 LNP1A1A4G5 178 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 PRRT4C9JH25 899 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 KLKB1P03952 638 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 CISD3P0C7P0 127 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 CHKAP35790 457 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 YWHAGP61981 247 aaKnown RBP eCLIP22.76■■□□□ 1.23
CBWD3-207ENST00000611426 UBXN1Q04323 297 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 LRMPQ12912 555 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 GOLGA7BQ2TAP0 167 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 SGO2Q562F6 1265 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 CCDC112Q8NEF3 446 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 SLC35C1Q96A29 364 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 ACOX2Q99424 681 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 LSM14BQ9BX40 385 aaKnown RBP22.76■■□□□ 1.23
CBWD3-207ENST00000611426 NDST4Q9H3R1 872 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 TSPAN16Q9UKR8 245 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 STRIP2Q9ULQ0 834 aa22.76■■□□□ 1.23
CBWD3-207ENST00000611426 ZBED1O96006 694 aa22.75■■□□□ 1.23
CBWD3-207ENST00000611426 CD19P15391 556 aa22.75■■□□□ 1.23
CBWD3-207ENST00000611426 GABRG2P18507 467 aa22.75■■□□□ 1.23
CBWD3-207ENST00000611426 CORO1AP31146 461 aaKnown RBP22.75■■□□□ 1.23
CBWD3-207ENST00000611426 PDE4CQ08493 712 aa22.75■■□□□ 1.23
CBWD3-207ENST00000611426 FIGNQ5HY92 759 aa22.75■■□□□ 1.23
CBWD3-207ENST00000611426 ARMCX6Q7L4S7 300 aa22.75■■□□□ 1.23
CBWD3-207ENST00000611426 MARCH2Q9P0N8 246 aa22.75■■□□□ 1.23
CBWD3-207ENST00000611426 HESX1Q9UBX0 185 aa22.75■■□□□ 1.23
CBWD3-207ENST00000611426 ACACBO00763 2458 aa22.74■■□□□ 1.23
CBWD3-207ENST00000611426 A0A1W2PQF6 199 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms