RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 PRDM8Q9NQV8 689 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 SNX15Q9NRS6 342 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 ASAP1Q9ULH1 1129 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 ENTPD2Q9Y5L3 495 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 HMX3A6NHT5 357 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 IRAK2O43187 625 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 CTIFO43310 598 aaKnown RBP4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 CA12O43570 354 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 PROP1O75360 226 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 C1QL1O75973 258 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 PDE8BO95263 885 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 CER1O95813 267 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 IGLV2-14P01704 120 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 FGAP02671 866 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 DRD4P21917 467 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 PNLIPRP1P54315 467 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 SOX10P56693 466 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 TXNL4AP83876 142 aaKnown RBP4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 DEUP1Q05D60 604 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 PPFIA1Q13136 1202 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 TAF5Q15542 800 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 HSP90AB4PQ58FF6 505 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 FAM90A2PQ658T7 463 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 CCDC144NLQ6NUI1 221 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 MSANTD2Q6P1R3 559 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 RAB11FIP2Q7L804 512 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 KRT27Q7Z3Y8 459 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 ZNF804AQ7Z570 1209 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 TRABD2AQ86V40 505 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 RASAL3Q86YV0 1011 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 SFTPA1Q8IWL2 248 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 SRRM1Q8IYB3 904 aaKnown RBP4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 CLASRPQ8N2M8 674 aaKnown RBP4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 PNPLA1Q8N8W4 532 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 UROC1Q96N76 676 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 BRD8Q9H0E9 1235 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 SAYSD1Q9NPB0 183 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 ITM2CQ9NQX7 267 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 SRP68Q9UHB9 627 aaKnown RBP4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 NFU1Q9UMS0 254 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 GPR52Q9Y2T5 361 aa4.92□□□□□ -1.62
SMCHD1-213ENST00000609587 FAM90A18PA6NE21 464 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 FAM90A16PA6NEW6 464 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 DNAJC9-AS1A6NH13 148 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 FAM90A9PA6NNJ1 464 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 EFCAB8A8MWE9 144 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 FAM90A5PA8MXJ8 464 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 PPP6R2O75170 966 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 RPP40O75818 363 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 FAM90A15PP0C7V4 464 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 FAM90A14PP0C7W9 464 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 HSD3B1P14060 373 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 MMP8P22894 467 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 FPR3P25089 353 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 ITPKBP27987 946 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 DIO1P49895 249 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 ARL4CP56559 192 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 NHLH1Q02575 133 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 LMAN2Q12907 356 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 MAPK7Q13164 816 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 TRIM60Q495X7 471 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 TSTD2Q5T7W7 516 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 NFRKBQ6P4R8 1299 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 KIRREL2Q6UWL6 708 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 NAPRTQ6XQN6 538 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 SLC29A4Q7RTT9 530 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 SLC22A17Q8WUG5 538 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 SMG7Q92540 1137 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 TBC1D5Q92609 795 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 PAAF1Q9BRP4 392 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 THAP7Q9BT49 309 aaPredicted RBP4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 CINPQ9BW66 212 aaPredicted RBP4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 KLK15Q9H2R5 256 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 ELAC1Q9H777 363 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 SAP30LQ9HAJ7 183 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 USP29Q9HBJ7 922 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 RXFP3Q9NSD7 469 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 FBXO28Q9NVF7 368 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 KIF17Q9P2E2 1029 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 CNTN6Q9UQ52 1028 aa4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 POLR2AP24928 1970 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-213ENST00000609587 GXYLT2A0PJZ3 443 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 KIF28PB7ZC32 967 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 NPHP1O15259 732 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 ALADP13716 330 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 CST5P28325 142 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 CCDC15Q0P6D6 951 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 DNASE1L3Q13609 305 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 RPS6KA2Q15349 733 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 ADCK5Q3MIX3 580 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 RNASE12Q5GAN4 147 aaKnown RBP4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 AKNAD1Q5T1N1 836 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 RRAGAQ7L523 313 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 MOGAT3Q86VF5 341 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 ANKRD18AQ8IVF6 992 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 SUGP1Q8IWZ8 645 aaKnown RBP4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 FAM71DQ8N9W8 422 aa4.9□□□□□ -1.63
SMCHD1-213ENST00000609587 HMGB4Q8WW32 186 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms