RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 CCR1P32246 355 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 ATP5C1P36542 298 aaKnown RBP17.14■□□□□ 0.33
PMF1-206ENST00000606952 NRIP1P48552 1158 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 KLF1Q13351 362 aaPredicted RBP17.14■□□□□ 0.33
PMF1-206ENST00000606952 ZNF211Q13398 564 aaPredicted RBP17.14■□□□□ 0.33
PMF1-206ENST00000606952 SMTNL2Q2TAL5 461 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 ARL13BQ3SXY8 428 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 KCNT1Q5JUK3 1230 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 C10orf120Q5SQS8 335 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 ACBD5Q5T8D3 534 aaPredicted RBP17.14■□□□□ 0.33
PMF1-206ENST00000606952 SCYL2Q6P3W7 929 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 MFSD7Q6UXD7 560 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 SLC13A5Q86YT5 568 aaPredicted RBP17.14■□□□□ 0.33
PMF1-206ENST00000606952 EFHBQ8N7U6 833 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 VN1R2Q8NFZ6 395 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 HAPLN3Q96S86 360 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 OSBPL2Q9H1P3 480 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 WDCPQ9H6R7 721 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 ZWILCHQ9H900 591 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 SFXN1Q9H9B4 322 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 PRDM16Q9HAZ2 1276 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 PCDH18Q9HCL0 1135 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 ANLNQ9NQW6 1124 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.14■□□□□ 0.33
PMF1-206ENST00000606952 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.14■□□□□ 0.33
PMF1-206ENST00000606952 MARCH2Q9P0N8 246 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 SFMBT1Q9UHJ3 866 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 DNMT3LQ9UJW3 386 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 CLUHO75153 1309 aa17.14■□□□□ 0.33
PMF1-206ENST00000606952 MYO9BQ13459 2157 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 DOCK6Q96HP0 2047 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 LRRD1A4D1F6 860 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 RFXAPO00287 272 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 CCL16O15467 120 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 COCHO43405 550 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 PTPN2P17706 415 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 GABRR2P28476 465 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 L1CAMP32004 1257 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 HTR7P34969 479 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 GJC1P36383 396 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 CETN2P41208 172 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 PAFAH1B1P43034 410 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 TBX4P57082 545 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 EFEMP1Q12805 493 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 DPYSL3Q14195 570 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 EFHC2Q5JST6 749 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 PRSS36Q5K4E3 855 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 AADACL2Q6P093 401 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 ANKS1BQ7Z6G8 1248 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 RBM23Q86U06 439 aaKnown RBP17.13■□□□□ 0.33
PMF1-206ENST00000606952 MAP7D3Q8IWC1 876 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 MNS1Q8NEH6 495 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 MAIP1Q8WWC4 291 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 OSBPL8Q9BZF1 889 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 DNMT3BQ9UBC3 853 aaKnown RBP17.13■□□□□ 0.33
PMF1-206ENST00000606952 ZMYM5Q9UJ78 669 aa17.13■□□□□ 0.33
PMF1-206ENST00000606952 NUP210Q8TEM1 1887 aaPredicted RBP17.13■□□□□ 0.33
PMF1-206ENST00000606952 MSI1O43347 362 aaKnown RBP17.12■□□□□ 0.33
PMF1-206ENST00000606952 MOSPD3O75425 235 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 TBX18O95935 607 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 FGGP02679 453 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 IL4RP24394 825 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 HOXC13P31276 330 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 HCAR3P49019 387 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 CDH6P55285 790 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 COL19A1Q14993 1142 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 SIX1Q15475 284 aaPredicted RBP17.12■□□□□ 0.33
PMF1-206ENST00000606952 CA9Q16790 459 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 ZC3H12AQ5D1E8 599 aaKnown RBP17.12■□□□□ 0.33
PMF1-206ENST00000606952 CCDC181Q5TID7 509 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 HS6ST3Q8IZP7 471 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 KCTD6Q8NC69 237 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 HSPH1Q92598 858 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 MRPS31Q92665 395 aaKnown RBP17.12■□□□□ 0.33
PMF1-206ENST00000606952 AZIN2Q96A70 460 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 RNF25Q96BH1 459 aaPredicted RBP17.12■□□□□ 0.33
PMF1-206ENST00000606952 PLD4Q96BZ4 506 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 MS4A14Q96JA4 679 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 CAPZA3Q96KX2 299 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 C1orf74Q96LT6 269 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 KCTD15Q96SI1 283 aaPredicted RBP17.12■□□□□ 0.33
PMF1-206ENST00000606952 HERPUD2Q9BSE4 406 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 KLF16Q9BXK1 252 aaPredicted RBP17.12■□□□□ 0.33
PMF1-206ENST00000606952 TKTL2Q9H0I9 626 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 TTYH1Q9H313 450 aaPredicted RBP17.12■□□□□ 0.33
PMF1-206ENST00000606952 RASAL2Q9UJF2 1139 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 NUDT5Q9UKK9 219 aa17.12■□□□□ 0.33
PMF1-206ENST00000606952 C2orf78A6NCI8 922 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 RIOK3O14730 519 aaKnown RBP17.11■□□□□ 0.33
PMF1-206ENST00000606952 SLU7O95391 586 aaKnown RBP17.11■□□□□ 0.33
PMF1-206ENST00000606952 GLP2RO95838 553 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 RHOP08100 348 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 SLC7A9P82251 487 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 COG7P83436 770 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 HYAL1Q12794 435 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 ARTNQ5T4W7 220 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 MANEALQ5VSG8 457 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 NUGGCQ68CJ6 796 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 BBS12Q6ZW61 710 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 SHKBP1Q8TBC3 707 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms