RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 BFSP2Q13515 415 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 CSHL1Q14406 222 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 FAM187BQ17R55 369 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 TIGD6Q17RP2 521 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 TTC22Q5TAA0 569 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 CEP85Q6P2H3 762 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 ACSM6Q6P461 480 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 KLHL17Q6TDP4 642 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 MOGAT3Q86VF5 341 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 P3H2Q8IVL5 708 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 GALNT15Q8N3T1 639 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 NPIPB3Q92617 1050 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 SARAFQ96BY9 339 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 VPS50Q96JG6 964 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 MMS19Q96T76 1030 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 ISCA1Q9BUE6 129 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 FZD4Q9ULV1 537 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 LZTS1Q9Y250 596 aa4.49□□□□□ -1.69
RNU6-88P-201ENST00000606801 TARM1B6A8C7 271 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 H3BNC9 293 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 EXOC3O60645 756 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 PPP6R2O75170 966 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 MT-CO3P00414 261 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 IGLV2-14P01704 120 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 CST5P28325 142 aaPredicted RBP4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 COPB1P53618 953 aaKnown RBP4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 SOX10P56693 466 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 RAE1P78406 368 aaKnown RBP4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 HOXA4Q00056 320 aaPredicted RBP4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 TAF5Q15542 800 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 TMEM95Q3KNT9 176 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 FAM153CQ494X1 144 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 SLC29A4Q7RTT9 530 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 MYRIPQ8NFW9 859 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 MAFAQ8NHW3 353 aaPredicted RBP4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 ZG16BQ96DA0 208 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 TRMT61AQ96FX7 289 aaKnown RBP4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 R3HDMLQ9H3Y0 253 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 ABHD16BQ9H3Z7 469 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 USP29Q9HBJ7 922 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 ABHD10Q9NUJ1 306 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 VPS4AQ9UN37 437 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 ZBTB1Q9Y2K1 713 aa4.48□□□□□ -1.69
RNU6-88P-201ENST00000606801 H0Y3Z8 333 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 FYB1O15117 783 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 JTBO76095 146 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 KAT7O95251 611 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 SFPQP23246 707 aaKnown RBP eCLIP4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 IGHMBP2P38935 993 aaKnown RBP4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 POLE2P56282 527 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 FOXL2P58012 376 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 PROK1P58294 105 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 CCDC15Q0P6D6 951 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 CUL4BQ13620 913 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 PRKG1Q13976 671 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 ZRSR2Q15696 482 aaKnown RBP4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 AAK1Q2M2I8 961 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 ERCC6LQ2NKX8 1250 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 PROSER3Q2NL68 480 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 P3H1Q32P28 736 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 AWAT1Q58HT5 328 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 AKNAD1Q5T1N1 836 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 ATPAF1Q5TC12 328 aaPredicted RBP4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 KYAT3Q6YP21 454 aaKnown RBP4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 TRIM72Q6ZMU5 477 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 RRAGAQ7L523 313 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 ZNF804AQ7Z570 1209 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 ARHGEF25Q86VW2 580 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 CCDC117Q8IWD4 279 aaPredicted RBP4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 FAM71DQ8N9W8 422 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 WDR60Q8WVS4 1066 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 ELOVL1Q9BW60 279 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 SNX15Q9NRS6 342 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 SH3BP4Q9P0V3 963 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 INSL6Q9Y581 213 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 DGKBQ9Y6T7 804 aa4.47□□□□□ -1.69
RNU6-88P-201ENST00000606801 FAM90A20PA6NIJ5 464 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 SLC38A8A6NNN8 435 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 H7C1Q1 480 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 CLIC1O00299 241 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 NKX2-8O15522 239 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 C1RP00736 705 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 CYP2D6P10635 497 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 ZNF37AP17032 561 aaPredicted RBP4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 BMP5P22003 454 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 MMP8P22894 467 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 ADD2P35612 726 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 CDK7P50613 346 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 JAK3P52333 1124 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 ARL4CP56559 192 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 NANOS3P60323 173 aaKnown RBP4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 RPL15P61313 204 aaKnown RBP4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 TXNL4AP83876 142 aaKnown RBP4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 GALNTL6Q49A17 601 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 NFRKBQ6P4R8 1299 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 TTC30AQ86WT1 665 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 HERC6Q8IVU3 1022 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 CSGALNACT1Q8TDX6 532 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 GLMPQ8WWB7 406 aa4.46□□□□□ -1.7
RNU6-88P-201ENST00000606801 DAZAP1Q96EP5 407 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms