RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 THAP10Q9P2Z0 257 aaPredicted RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 HOOK1Q9UJC3 728 aaKnown RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 TSPAN16Q9UKR8 245 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 ANGPTL2Q9UKU9 493 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 STRIP2Q9ULQ0 834 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 CLEC4EQ9ULY5 219 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 STON1Q9Y6Q2 735 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 GON4LQ3T8J9 2241 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 YJEFN3A6XGL0 299 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 E7ENQ6 273 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 RNF225M0QZC1 329 aaPredicted RBP7.97□□□□□ -1.13
CUX1-219ENST00000606749 O00370 1275 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 PSMA7O14818 248 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 NPC1O15118 1278 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 TIMM44O43615 452 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 GABBR2O75899 941 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 KRT37O76014 449 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 CYBBP04839 570 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 CFIP05156 583 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 CEACAM1P13688 526 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 CD19P15391 556 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 ENGP17813 658 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 CSRP1P21291 193 aaKnown RBP7.97□□□□□ -1.13
CUX1-219ENST00000606749 TBXAS1P24557 533 aaPredicted RBP7.97□□□□□ -1.13
CUX1-219ENST00000606749 HOXD12P35452 270 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 HARS2P49590 506 aaKnown RBP7.97□□□□□ -1.13
CUX1-219ENST00000606749 ZNF132P52740 706 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 ADIGQ0VDE8 80 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 STIM1Q13586 685 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 ENPP2Q13822 863 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 BECN1Q14457 450 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 UAP1L1Q3KQV9 507 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 FUT11Q495W5 492 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 TMEM270Q6UE05 265 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 LCLAT1Q6UWP7 414 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 METTL3Q86U44 580 aaKnown RBP7.97□□□□□ -1.13
CUX1-219ENST00000606749 FMNL3Q8IVF7 1028 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 SLC41A1Q8IVJ1 513 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 SCML4Q8N228 414 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 RBBP8NLQ8NC74 664 aaPredicted RBP7.97□□□□□ -1.13
CUX1-219ENST00000606749 LMO3Q8TAP4 145 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 DDI1Q8WTU0 396 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 SLC35F5Q8WV83 523 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 TFAP2BQ92481 460 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 EDEM1Q92611 657 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 PLD4Q96BZ4 506 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 ZNF419Q96HQ0 510 aaPredicted RBP7.97□□□□□ -1.13
CUX1-219ENST00000606749 CEP63Q96MT8 703 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 IPO9Q96P70 1041 aaKnown RBP7.97□□□□□ -1.13
CUX1-219ENST00000606749 SLC2A11Q9BYW1 496 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 FSCN3Q9NQT6 498 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 OLA1Q9NTK5 396 aaKnown RBP7.97□□□□□ -1.13
CUX1-219ENST00000606749 ELOVL2Q9NXB9 296 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 HESX1Q9UBX0 185 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 SFMBT1Q9UHJ3 866 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 MAN1B1Q9UKM7 699 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 SLC6A14Q9UN76 642 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 CYP8B1Q9UNU6 501 aa7.97□□□□□ -1.13
CUX1-219ENST00000606749 HBS1LQ9Y450 684 aaKnown RBP7.97□□□□□ -1.13
CUX1-219ENST00000606749 PLXND1Q9Y4D7 1925 aa7.96□□□□□ -1.13
CUX1-219ENST00000606749 PPP1R3GB7ZBB8 358 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 NDUFS2O75306 463 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 SERPINF2P08697 491 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 PAEPP09466 180 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 SETSIPP0DME0 302 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 LCP1P13796 627 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 BMP6P22004 513 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 PPP1R2P41236 205 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 IL12RB1P42701 662 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 MAPK8P45983 427 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 DAOAP59103 153 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 GFPT1Q06210 699 aaPredicted RBP7.96□□□□□ -1.14
CUX1-219ENST00000606749 E2F5Q15329 346 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 CNGA2Q16280 664 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 ST3GAL2Q16842 350 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 CCDC40Q4G0X9 1142 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 MPPE1Q53F39 396 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 TMEM215Q68D42 235 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 TTI2Q6NXR4 508 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 PMF1Q6P1K2 205 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 TMPRSS6Q8IU80 811 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 TRIML1Q8N9V2 468 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 RNF139Q8WU17 664 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 UCMAQ8WVF2 138 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 SORCS1Q8WY21 1168 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 KAT5Q92993 513 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 TMA16Q96EY4 203 aaKnown RBP7.96□□□□□ -1.14
CUX1-219ENST00000606749 HSPA12BQ96MM6 686 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 ZSWIM1Q9BR11 485 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 MKRN2Q9H000 416 aaKnown RBP7.96□□□□□ -1.14
CUX1-219ENST00000606749 PRDM16Q9HAZ2 1276 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 CAPN10Q9HC96 672 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 CD93Q9NPY3 652 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 CNGB3Q9NQW8 809 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 ITM2CQ9NQX7 267 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 ABCC13Q9NSE7 274 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 WSB2Q9NYS7 404 aaPredicted RBP7.96□□□□□ -1.14
CUX1-219ENST00000606749 USP36Q9P275 1121 aaKnown RBP7.96□□□□□ -1.14
CUX1-219ENST00000606749 STOML2Q9UJZ1 356 aa7.96□□□□□ -1.14
CUX1-219ENST00000606749 WASF3Q9UPY6 502 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms