RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 FAM149B1Q96BN6 582 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 LSM14BQ9BX40 385 aaKnown RBP12.83□□□□□ -0.36
CTSA-210ENST00000606000 SLC4A5Q9BY07 1137 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 DCLK3Q9C098 648 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 USP18Q9UMW8 372 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 HBS1LQ9Y450 684 aaKnown RBP12.83□□□□□ -0.36
CTSA-210ENST00000606000 RAD54BQ9Y620 910 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 FBXO21O94952 628 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 IGLV3-27P01718 113 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 NCAM1P13591 858 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 SLC6A4P31645 630 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 CLCN1P35523 988 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 CHKAP35790 457 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 RAPGEF1Q13905 1077 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 TAF5Q15542 800 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 EOGTQ5NDL2 527 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 CDKAL1Q5VV42 579 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 SYPL2Q5VXT5 272 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 NADSYN1Q6IA69 706 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 KIAA1211LQ6NV74 962 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 TAC4Q86UU9 113 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 CPXM2Q8N436 756 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 CCDC26Q8TAB7 109 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 ENOX1Q8TC92 643 aaKnown RBP12.82□□□□□ -0.36
CTSA-210ENST00000606000 HMGB4Q8WW32 186 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 RLN3Q8WXF3 142 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 RMDN1Q96DB5 314 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 MYEOVQ96EZ4 313 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 CPXM1Q96SM3 734 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 VPS16Q9H269 839 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 SMOC1Q9H4F8 434 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 CACNA2D2Q9NY47 1150 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 EBF1Q9UH73 591 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 FBXO10Q9UK96 956 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 ZNF510Q9Y2H8 683 aa12.82□□□□□ -0.36
CTSA-210ENST00000606000 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.82□□□□□ -0.36
CTSA-210ENST00000606000 A0A1W2PQF6 199 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 WASH3PC4AMC7 463 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 GOLGA6L22H0YM25 854 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 GFRA2O00451 464 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 RETP07949 1114 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 HOXB2P14652 356 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 EEF1GP26641 437 aaKnown RBP12.81□□□□□ -0.36
CTSA-210ENST00000606000 HOXD9P28356 352 aaPredicted RBP12.81□□□□□ -0.36
CTSA-210ENST00000606000 HARS2P49590 506 aaKnown RBP12.81□□□□□ -0.36
CTSA-210ENST00000606000 TBX4P57082 545 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 DRAP1Q14919 205 aaPredicted RBP12.81□□□□□ -0.36
CTSA-210ENST00000606000 KRT31Q15323 416 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 PLK5Q496M5 336 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 KLHDC7AQ5VTJ3 777 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 RFWD3Q6PCD5 774 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 CACNA2D4Q7Z3S7 1137 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 WFDC5Q8TCV5 224 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 DDI1Q8WTU0 396 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 SORCS1Q8WY21 1168 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 GOLGA1Q92805 767 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 FCRL2Q96LA5 508 aaPredicted RBP12.81□□□□□ -0.36
CTSA-210ENST00000606000 FAM81BQ96LP2 452 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 PRICKLE1Q96MT3 831 aaPredicted RBP12.81□□□□□ -0.36
CTSA-210ENST00000606000 NAA15Q9BXJ9 866 aaKnown RBP12.81□□□□□ -0.36
CTSA-210ENST00000606000 DUSP15Q9H1R2 295 aaPredicted RBP12.81□□□□□ -0.36
CTSA-210ENST00000606000 SLC6A17Q9H1V8 727 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 ARRDC1-AS1Q9H2J1 176 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 CD93Q9NPY3 652 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 FANCLQ9NW38 375 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 TMEM63CQ9P1W3 806 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 XPO7Q9UIA9 1087 aaKnown RBP12.81□□□□□ -0.36
CTSA-210ENST00000606000 STARD13Q9Y3M8 1113 aa12.81□□□□□ -0.36
CTSA-210ENST00000606000 TNRC6BQ9UPQ9 1833 aaKnown RBP12.81□□□□□ -0.36
CTSA-210ENST00000606000 PIEZO1Q92508 2521 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 EPHB6O15197 1021 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 GRAP2O75791 330 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 ERBB2P04626 1255 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 CYBBP04839 570 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 GABRG2P18507 467 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 NTSR1P30989 418 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 GBP1P32455 592 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 ACADSBP45954 432 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 ID4P47928 161 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 PTK2Q05397 1052 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 MEA1Q16626 185 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 HSF5Q4G112 596 aaPredicted RBP12.8□□□□□ -0.36
CTSA-210ENST00000606000 PTPN20Q4JDL3 420 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 FAM133BQ5BKY9 247 aaKnown RBP12.8□□□□□ -0.36
CTSA-210ENST00000606000 CCDC183Q5T5S1 534 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 TMEM215Q68D42 235 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 SASS6Q6UVJ0 657 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 FAM183BPQ6ZVS7 135 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 TMEM110Q86TL2 294 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 FAM71AQ8IYT1 594 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 CHPFQ8IZ52 775 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 OLIG1Q8TAK6 271 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 STK32AQ8WU08 396 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 GANQ9H2C0 597 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 CD248Q9HCU0 757 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 POLMQ9NP87 494 aaPredicted RBP12.8□□□□□ -0.36
CTSA-210ENST00000606000 SEMA4GQ9NTN9 838 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 BCCIPQ9P287 314 aaKnown RBP eCLIP12.8□□□□□ -0.36
CTSA-210ENST00000606000 STOML2Q9UJZ1 356 aa12.8□□□□□ -0.36
CTSA-210ENST00000606000 PCDHGC3Q9UN70 934 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms