RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CCDC195A0A1B0GUA6 201 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SMIM35A0A1B0GVV1 85 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 HUS1O60921 280 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 DCTN3O75935 186 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MYL3P08590 195 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TSHRP16473 764 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SERPINB4P48594 390 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TAF6P49848 677 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 IRX4P78413 519 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MRPS5P82675 430 aaKnown RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 OLIG2Q13516 323 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 RIPK1Q13546 671 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TTC39BQ5VTQ0 682 aaPredicted RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 WSCD1Q658N2 575 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CDKL3Q8IVW4 592 aaPredicted RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PDCD7Q8N8D1 485 aaKnown RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 B3GALNT2Q8NCR0 500 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ARMC2Q8NEN0 867 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 USP6NLQ92738 828 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FAM124BQ9H5Z6 455 aaPredicted RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TXLNGQ9NUQ3 528 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SEPT10Q9P0V9 454 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ZFP69BQ9UJL9 534 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 C2CD2LO14523 706 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MFSD11O43934 449 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 GCATO75600 419 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 RFPL1O75677 317 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CD4P01730 458 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 RPSAP08865 295 aaKnown RBP12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SNRPAP09012 282 aaKnown RBP12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SNX16P57768 344 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 AP1B1Q10567 949 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 KIAA0319Q5VV43 1072 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CES4AQ5XG92 561 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TWF2Q6IBS0 349 aaKnown RBP12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 APBB1IPQ7Z5R6 666 aaPredicted RBP12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 RNF169Q8NCN4 708 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SMG8Q8ND04 991 aaKnown RBP12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 IQCGQ9H095 443 aaKnown RBP12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 KCNK13Q9HB14 408 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 HEY2Q9UBP5 337 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 WDR27A2RRH5 827 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SPAG6O75602 509 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 KRT37O76014 449 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 AMHP03971 560 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TROVE2P10155 538 aaKnown RBP eCLIP12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 RARBP10826 455 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ALADP13716 330 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PRKCHP24723 683 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 EPHB2P29323 1055 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SLC8A1P32418 973 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MATKP42679 507 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SESN2P58004 480 aaPredicted RBP12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ANKRD20A2Q5SQ80 823 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 WLSQ5T9L3 541 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ANKRD20A1Q5TYW2 823 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ANKRD20A3Q5VUR7 823 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 OTUD1Q5VV17 481 aaPredicted RBP12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PAQR9Q6ZVX9 377 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CLNKQ7Z7G1 428 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ANKRD23Q86SG2 305 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TTC7BQ86TV6 843 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CCNYQ8ND76 341 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 HTR3CQ8WXA8 447 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 EBNA1BP2Q99848 306 aaKnown RBP12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TBC1D10AQ9BXI6 508 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PNPLA8Q9NP80 782 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ARHGEF4Q9NR80 690 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PCMTD2Q9NV79 361 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 USP3Q9Y6I4 520 aa12.19□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FAM237BA0A1B0GVD1 139 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 M0QYT0 321 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 F7P08709 466 aaPredicted RBP12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SERPINB3P29508 390 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ARL4AP40617 200 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MAGEA3P43357 314 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MAP3K7CLP57077 242 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ADAM17P78536 824 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PRKD1Q15139 912 aaPredicted RBP12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FAM110CQ1W6H9 321 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CES3Q6UWW8 571 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MAGEC3Q8TD91 643 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TFB1MQ8WVM0 346 aaKnown RBP12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 UPF1Q92900 1129 aaKnown RBP eCLIP12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 QKIQ96PU8 341 aaKnown RBP eCLIP12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TRIM55Q9BYV6 548 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 GDAP2Q9NXN4 497 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 DCAF8L1A6NGE4 600 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FAM72CH0Y354 149 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PTGESO14684 152 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ANP32DO95626 131 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 EZRP15311 586 aaKnown RBP12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 GMPRP36959 345 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SKIV2L2P42285 1042 aaKnown RBP12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MAGEA6P43360 314 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CTC1Q2NKJ3 1217 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SLC25A52Q3SY17 297 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FAM72AQ5TYM5 149 aa12.18□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FAM72DQ6L9T8 149 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms