RNA–Protein interactions for RNA: ENST00000601392.5

CELF4-222, Transcript of CUGBP Elav-like family member 4, human

TSL 1 (best)

Gene CELF4, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-222	ENST00000601392	MTA1	Q13330	715 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	NNT	Q13423	1086 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	TAF12	Q16514	161 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	WHAMMP3	Q1A5X7	153 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	SDHAF4	Q5VUM1	108 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	GET4	Q7L5D6	327 aa	Predicted RBP	13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	UBALD2	Q8IYN6	164 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	RCOR2	Q8IZ40	523 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	LEMD2	Q8NC56	503 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	EXD1	Q8NHP7	514 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	ACTRT1	Q8TDG2	376 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	GIPC2	Q8TF65	315 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	RNF139	Q8WU17	664 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	FAM172A	Q8WUF8	416 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	ZNF707	Q96C28	371 aa	Predicted RBP	13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	ZNF512	Q96ME7	567 aa	Predicted RBP	13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	EFR3B	Q9Y2G0	817 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	MRFAP1	Q9Y605	127 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	TECTA	O75443	2155 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392		A0A1W2PQH9	124 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	ZNF487	B1APH4	448 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392		M0QYT0	321 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	MDM4	O15151	490 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	CCL16	O15467	120 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	PRPSAP2	O60256	369 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	FGF19	O95750	216 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	LRG1	P02750	347 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	FSHR	P23945	695 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	CETN2	P41208	172 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	CXCR3	P49682	368 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	SULT1E1	P49888	294 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	KPNA1	P52294	538 aa	Predicted RBP	13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	ZNF135	P52742	658 aa	Predicted RBP	13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	HDAC4	P56524	1084 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	TAS2R40	P59535	323 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	TUBB4B	P68371	445 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	CREG2	Q8IUH2	290 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	SUGP1	Q8IWZ8	645 aa	Known RBP	13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	ELMOD1	Q8N336	334 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	STKLD1	Q8NE28	680 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	FAM71B	Q8TC56	605 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	ALG3	Q92685	438 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	KRT35	Q92764	455 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	NTAN1	Q96AB6	310 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	PBXIP1	Q96AQ6	731 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	RBM41	Q96IZ5	413 aa	Known RBP	13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	NAP1L3	Q99457	506 aa	Predicted RBP	13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	SMOC2	Q9H3U7	446 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	PRDM16	Q9HAZ2	1276 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	NMUR1	Q9HB89	426 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	TRPM5	Q9NZQ8	1165 aa		13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.28	□□□□□ -0.28
CELF4-222	ENST00000601392	MUC6	Q6W4X9	2439 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	ZNF840P	A6NDX5	716 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	KCNK3	O14649	394 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	RIOK3	O14730	519 aa	Known RBP	13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	F11	P03951	625 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	SLC2A3	P11169	496 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	RARG	P13631	454 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	PTPN7	P35236	360 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	PAFAH1B1	P43034	410 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	EPHA5	P54756	1037 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	ATP11A	P98196	1134 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	DEUP1	Q05D60	604 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	SCAP	Q12770	1279 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	PDK2	Q15119	407 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	BRMS1L	Q5PSV4	323 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	ERMARD	Q5T6L9	678 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	SH3PXD2A	Q5TCZ1	1133 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	MAP7D3	Q8IWC1	876 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	GPR152	Q8TDT2	470 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	DQX1	Q8TE96	717 aa	Known RBP	13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	SERPINB11	Q96P15	392 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	LRRC3	Q9BY71	257 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	GMIP	Q9P107	970 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	ZMYM5	Q9UJ78	669 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	TRIO	O75962	3097 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	PATJ	Q8NI35	1801 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	MYO10	Q9HD67	2058 aa		13.27	□□□□□ -0.29
CELF4-222	ENST00000601392	UQCRHL	A0A096LP55	91 aa		13.26	□□□□□ -0.29
CELF4-222	ENST00000601392	IRAK2	O43187	625 aa		13.26	□□□□□ -0.29
CELF4-222	ENST00000601392	UQCRH	P07919	91 aa		13.26	□□□□□ -0.29
CELF4-222	ENST00000601392	RARA	P10276	462 aa		13.26	□□□□□ -0.29
CELF4-222	ENST00000601392	PYGM	P11217	842 aa		13.26	□□□□□ -0.29
CELF4-222	ENST00000601392	IL1R2	P27930	398 aa		13.26	□□□□□ -0.29
CELF4-222	ENST00000601392	ADRA1B	P35368	520 aa		13.26	□□□□□ -0.29
CELF4-222	ENST00000601392	RING1	Q06587	406 aa		13.26	□□□□□ -0.29
CELF4-222	ENST00000601392	CKAP4	Q07065	602 aa	Known RBP	13.26	□□□□□ -0.29
CELF4-222	ENST00000601392	PPP2R5D	Q14738	602 aa		13.26	□□□□□ -0.29
CELF4-222	ENST00000601392	TAZ	Q16635	292 aa		13.26	□□□□□ -0.29
CELF4-222	ENST00000601392	ARL13B	Q3SXY8	428 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms