RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 AQP5P55064 265 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 LAMC2Q13753 1193 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 TPSAB1Q15661 275 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 CCDC6Q16204 474 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 ADGRF2Q8IZF7 708 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 PYROXD2Q8N2H3 581 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 C11orf84Q9BUA3 381 aaPredicted RBP20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 TRIM6Q9C030 488 aaPredicted RBP20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 FAM124BQ9H5Z6 455 aaPredicted RBP20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 NMRK1Q9NWW6 199 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 DTLQ9NZJ0 730 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 HES2Q9Y543 173 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 CXCL11O14625 94 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 SETSIPP0DME0 302 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 AMPD1P23109 780 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 ADORA2BP29275 332 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 CRHR1P34998 444 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 TMEM62Q0P6H9 643 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 HEATR6Q6AI08 1181 aaKnown RBP20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 ANO7Q6IWH7 933 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 TAPT1Q6NXT6 567 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 RFX8Q6ZV50 586 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 NT5DC4Q86YG4 428 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 STKLD1Q8NE28 680 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 DTX3LQ8TDB6 740 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 NRG4Q8WWG1 115 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 DNAJC9Q8WXX5 260 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 DCPSQ96C86 337 aaKnown RBP20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 SPDL1Q96EA4 605 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 QKIQ96PU8 341 aaKnown RBP eCLIP20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 OSBPL1AQ9BXW6 950 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 STOML1Q9UBI4 398 aa20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.89■□□□□ 0.94
SHKBP1-225ENST00000600733 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 WDR27A2RRH5 827 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 B2RBV5 119 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 DDNO94850 711 aaPredicted RBP20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 BPGMP07738 259 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 PDHA1P08559 390 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 PDGFRBP09619 1106 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 VAV1P15498 845 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 GOT1P17174 413 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 PGM1P36871 562 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 PTPN9P43378 593 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 RCN2Q14257 317 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 SMAD1Q15797 465 aaKnown RBP20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 KIZQ2M2Z5 673 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 MUM1Q2TAK8 710 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 NBPF20Q3BBV1 942 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 FAM91A1Q658Y4 838 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 MAMDC4Q6UXC1 1216 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 APBB2Q92870 758 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 C16orf70Q9BSU1 422 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 MROH8Q9H579 483 aa20.89■□□□□ 0.93
SHKBP1-225ENST00000600733 ASB14A6NK59 587 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 CAPN9O14815 690 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 NCBP2-AS2Q69YL0 99 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 CASC4Q6P4E1 433 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 C4orf22Q6V702 233 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 CRLF3Q8IUI8 442 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 SMC1BQ8NDV3 1235 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 NLGN2Q8NFZ4 835 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 CENPIQ92674 756 aaPredicted RBP20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 LGMNQ99538 433 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 XAB2Q9HCS7 855 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 MOCS1Q9NZB8 636 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 HBS1LQ9Y450 684 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 SPDYE5A6NIY4 337 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 A8MXQ7 604 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 ZNF487B1APH4 448 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 SNNO75324 88 aaPredicted RBP20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 TBX10O75333 385 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 UPP2O95045 317 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 PSMG1O95456 288 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 NR2C2P49116 596 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 KDSRQ06136 332 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 SEMA5AQ13591 1074 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 MARCH8Q5T0T0 291 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 SNX30Q5VWJ9 437 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 ZDHHC17Q8IUH5 632 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 PDCD7Q8N8D1 485 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 RBM15BQ8NDT2 890 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 EIF2AQ9BY44 585 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 WWP1Q9H0M0 922 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 MMADHCQ9H3L0 296 aaPredicted RBP20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 GJD2Q9UKL4 321 aa20.88■□□□□ 0.93
SHKBP1-225ENST00000600733 LIN7AO14910 233 aaPredicted RBP20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 NVLO15381 856 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 ADCYAP1R1P41586 468 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 ALDH18A1P54886 795 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 TSNAXIP1Q2TAA8 658 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 CAPRIN2Q6IMN6 1127 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 C16orf46Q6P387 395 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 SLC26A9Q7LBE3 791 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 PPTC7Q8NI37 304 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 EBF4Q9BQW3 602 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 CEP41Q9BYV8 373 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 H3BRB1 525 aa20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 ZFXP17010 805 aaPredicted RBP20.87■□□□□ 0.93
SHKBP1-225ENST00000600733 VHLP40337 213 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms