RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 PABPC1LQ4VXU2 614 aaKnown RBP13.25□□□□□ -0.29
ZNF548-210ENST00000600442 PPP6R3Q5H9R7 873 aaPredicted RBP13.25□□□□□ -0.29
ZNF548-210ENST00000600442 DAB2IPQ5VWQ8 1189 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 CCDC137Q6PK04 289 aaKnown RBP13.25□□□□□ -0.29
ZNF548-210ENST00000600442 MFSD7Q6UXD7 560 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 GSTA5Q7RTV2 222 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 EIF1ADQ8N9N8 165 aaKnown RBP13.25□□□□□ -0.29
ZNF548-210ENST00000600442 KLHL23Q8NBE8 558 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 ATL2Q8NHH9 583 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 MICAL1Q8TDZ2 1067 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 RAPGEF5Q92565 580 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 LRRC1Q9BTT6 524 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 PARD6BQ9BYG5 372 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 RXFP1Q9HBX9 757 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 ARFGAP3Q9NP61 516 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 IL37Q9NZH6 218 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 PCYOX1Q9UHG3 505 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 FBXW11Q9UKB1 542 aa13.25□□□□□ -0.29
ZNF548-210ENST00000600442 hCG_1818297A0A087WSY0 165 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 SYNJ2BP-COX16A0A087WUM0 186 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-210ENST00000600442 WDR27A2RRH5 827 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 CCDC151A5D8V7 595 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 SLC38A8A6NNN8 435 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 PRR33A8MZF0 331 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 APOL1O14791 398 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 MCF2LO15068 1137 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 HEXIM1O94992 359 aaKnown RBP13.24□□□□□ -0.29
ZNF548-210ENST00000600442 IL9P15248 144 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 TGM2P21980 687 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 IL1R2P27930 398 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 COILP38432 576 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-210ENST00000600442 NR2C2P49116 596 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 CDR1P51861 262 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 NNTQ13423 1086 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 DPYSL2Q16555 572 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 SYPL2Q5VXT5 272 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 TRNP1Q6NT89 227 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 DRICH1Q6PGQ1 229 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-210ENST00000600442 TMCO3Q6UWJ1 677 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 BBS12Q6ZW61 710 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 FAM131BQ86XD5 332 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 CPNE8Q86YQ8 564 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 TCEAL8Q8IYN2 117 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 ARFGAP1Q8N6T3 406 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 PRELID2Q8N945 189 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 BBOF1Q8ND07 529 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 LRRN4CLQ8ND94 238 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 NDRG1Q92597 394 aaKnown RBP13.24□□□□□ -0.29
ZNF548-210ENST00000600442 EDEM1Q92611 657 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 P3H4Q92791 437 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 CCDC114Q96M63 670 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 ZNF512Q96ME7 567 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-210ENST00000600442 EPAS1Q99814 870 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 C17orf80Q9BSJ5 609 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 SNRNP25Q9BV90 132 aaKnown RBP13.24□□□□□ -0.29
ZNF548-210ENST00000600442 FAM129AQ9BZQ8 928 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 DDX47Q9H0S4 455 aaKnown RBP13.24□□□□□ -0.29
ZNF548-210ENST00000600442 ZBP1Q9H171 429 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 SMOC2Q9H3U7 446 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 FAM114A2Q9NRY5 505 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 TMEM30AQ9NV96 361 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 KLHL11Q9NVR0 708 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 TRPM5Q9NZQ8 1165 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 COX16Q9P0S2 106 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 TRIOO75962 3097 aa13.24□□□□□ -0.29
ZNF548-210ENST00000600442 MYH10P35580 1976 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 C5orf42Q9H799 3197 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 A0A1W2PQH9 124 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 FAM92AA1XBS5 289 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 CST8O60676 142 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 APOEP02649 317 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 RPL17P18621 184 aaKnown RBP13.23□□□□□ -0.29
ZNF548-210ENST00000600442 KLRC2P26717 231 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 ADRA1BP35368 520 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 ACTN2P35609 894 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 CXCR3P49682 368 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 GUCY2DQ02846 1103 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 SCAPQ12770 1279 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 TAF10Q12962 218 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 KLF1Q13351 362 aaPredicted RBP13.23□□□□□ -0.29
ZNF548-210ENST00000600442 BYSLQ13895 437 aaKnown RBP13.23□□□□□ -0.29
ZNF548-210ENST00000600442 PPP2R5DQ14738 602 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 TAZQ16635 292 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 ATP13A4Q4VNC1 1196 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 SH3PXD2AQ5TCZ1 1133 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 PTCRAQ6ISU1 281 aaPredicted RBP13.23□□□□□ -0.29
ZNF548-210ENST00000600442 RSPO2Q6UXX9 243 aaPredicted RBP13.23□□□□□ -0.29
ZNF548-210ENST00000600442 MTERF4Q7Z6M4 381 aaKnown RBP13.23□□□□□ -0.29
ZNF548-210ENST00000600442 ALYREFQ86V81 257 aaKnown RBP13.23□□□□□ -0.29
ZNF548-210ENST00000600442 CCDC89Q8N998 374 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 DQX1Q8TE96 717 aaKnown RBP13.23□□□□□ -0.29
ZNF548-210ENST00000600442 SLCO2A1Q92959 643 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 RNF157Q96PX1 679 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 HAPLN3Q96S86 360 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 TCF25Q9BQ70 676 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 TTLL2Q9BWV7 592 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 VN1R3Q9BXE9 311 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 PCDH18Q9HCL0 1135 aa13.23□□□□□ -0.29
ZNF548-210ENST00000600442 TLR9Q9NR96 1032 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms