RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 MFSD11O43934 449 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 CD4P01730 458 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 L1CAMP32004 1257 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 ELF3P78545 371 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 POU5F1BQ06416 359 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 MAP2K5Q13163 448 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 RWDD4Q6NW29 188 aaKnown RBP11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 DNAAF3Q8N9W5 541 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 CELF6Q96J87 481 aaKnown RBP11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 SLC4A5Q9BY07 1137 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 OTOFQ9HC10 1997 aa11.93□□□□□ -0.5
ARHGEF1-220ENST00000600274 MYBPHLA2RUH7 354 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 TCEA3O75764 348 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 ATP6V1G2O95670 118 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 F2P00734 622 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 KRT16P08779 473 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 GHRP10912 638 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 PTPN7P35236 360 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 CPA2P48052 419 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 TMPRSS15P98073 1019 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 CCDC6Q16204 474 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 C16orf46Q6P387 395 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 ANKRD23Q86SG2 305 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 TMEM110Q86TL2 294 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 CDKL3Q8IVW4 592 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 AGGF1Q8N302 714 aaeCLIP11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 RFWD2Q8NHY2 731 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 KCNN1Q92952 543 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 VRTNQ9H8Y1 702 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 DDIT4Q9NX09 232 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 COL1A2P08123 1366 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 ATP9BO43861 1147 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 B3GAT3O94766 335 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 TROVE2P10155 538 aaKnown RBP eCLIP11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 PTPN1P18031 435 aaKnown RBP11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 CLCNKBP51801 687 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 SV2CQ496J9 727 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 NDUFAF2Q8N183 169 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 COLGALT1Q8NBJ5 622 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 GTF3C2Q8WUA4 911 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 DCAKDQ8WVC6 231 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 SENP8Q96LD8 212 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 MANSC1Q9H8J5 431 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 DTLQ9NZJ0 730 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 TXNDC16Q9P2K2 825 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 GGA2Q9UJY4 613 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 EFR3BQ9Y2G0 817 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 CDY2AQ9Y6F7 541 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 MGAMO43451 1857 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 MOCS2O96007 188 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 RCN2Q14257 317 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 ACAP1Q15027 740 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 IFNLR1Q8IU57 520 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 TSSK1BQ9BXA7 367 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 CCDC134Q9H6E4 229 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 PLEKHA5Q9HAU0 1116 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 FBXO6Q9NRD1 293 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 ST3GAL5Q9UNP4 418 aa11.92□□□□□ -0.5
ARHGEF1-220ENST00000600274 TRIP12Q14669 1992 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 RNF103O00237 685 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 NRP1O14786 923 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 RASSF9O75901 435 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 KRT37O76014 449 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 FAM200BP0CF97 657 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 CSH1P0DML2 217 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 CSH2P0DML3 217 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 MGAT1P26572 445 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 PSMB4P28070 264 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 CPT1AP50416 773 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 PDE1BQ01064 536 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 PREPLQ4J6C6 727 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 TAF1BQ53T94 588 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 CDHR3Q6ZTQ4 885 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 TTC39CQ8N584 583 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 LRRC52Q8N7C0 313 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 AGR3Q8TD06 166 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 TFB1MQ8WVM0 346 aaKnown RBP11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 ACSS2Q9NR19 701 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 SENP1Q9P0U3 644 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 ARMCX1Q9P291 453 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 ZFP69BQ9UJL9 534 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 G3BP2Q9UN86 482 aaKnown RBP11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 HTTP42858 3142 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 SMIM35A0A1B0GVV1 85 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 EEF2KO00418 725 aaKnown RBP11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 NQO1P15559 274 aaKnown RBP11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 TPH1P17752 444 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 THPOP40225 353 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 BRCC3P46736 316 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 KCNJ11Q14654 390 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 TAF11Q15544 211 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 PDK4Q16654 411 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 UNC5AQ6ZN44 842 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 NLRP9Q7RTR0 991 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 CAND1Q86VP6 1230 aaKnown RBP11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 FAM228AQ86W67 206 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 ZNF354CQ86Y25 554 aa11.91□□□□□ -0.5
ARHGEF1-220ENST00000600274 TTC16Q8NEE8 873 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms