RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 BHMTQ93088 406 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 HPDLQ96IR7 371 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 B3GNT5Q9BYG0 378 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 LHX5Q9H2C1 402 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 ADAMTS1Q9UHI8 967 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 MTMR6Q9Y217 621 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 PCDHB1Q9Y5F3 818 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 HEMK1Q9Y5R4 338 aaPredicted RBP18.59■□□□□ 0.57
SSBP4-207ENST00000600244 CLDN5O00501 218 aa18.58■□□□□ 0.56
SSBP4-207ENST00000600244 YKT6O15498 198 aa18.58■□□□□ 0.56
SSBP4-207ENST00000600244 PENKP01210 267 aaPredicted RBP18.58■□□□□ 0.56
SSBP4-207ENST00000600244 WNT1P04628 370 aa18.58■□□□□ 0.56
SSBP4-207ENST00000600244 IGHV4-34P06331 123 aa18.58■□□□□ 0.56
SSBP4-207ENST00000600244 PTPN1P18031 435 aaKnown RBP18.58■□□□□ 0.56
SSBP4-207ENST00000600244 DDIT3P35638 169 aa18.58■□□□□ 0.56
SSBP4-207ENST00000600244 GNL1P36915 607 aaPredicted RBP18.58■□□□□ 0.56
SSBP4-207ENST00000600244 BCAT1P54687 386 aa18.58■□□□□ 0.56
SSBP4-207ENST00000600244 CAMK2GQ13555 558 aaPredicted RBP18.58■□□□□ 0.56
SSBP4-207ENST00000600244 KDM7AQ6ZMT4 941 aa18.58■□□□□ 0.56
SSBP4-207ENST00000600244 EXD3Q8N9H8 876 aa18.58■□□□□ 0.56
SSBP4-207ENST00000600244 PIWIL1Q96J94 861 aaKnown RBP18.58■□□□□ 0.56
SSBP4-207ENST00000600244 KCNK16Q96T55 309 aa18.58■□□□□ 0.56
SSBP4-207ENST00000600244 MRPL45Q9BRJ2 306 aaKnown RBP18.58■□□□□ 0.56
SSBP4-207ENST00000600244 MTMR12Q9C0I1 747 aa18.58■□□□□ 0.56
SSBP4-207ENST00000600244 BTBD1Q9H0C5 482 aa18.58■□□□□ 0.56
SSBP4-207ENST00000600244 ELOVL2Q9NXB9 296 aa18.58■□□□□ 0.56
SSBP4-207ENST00000600244 TP53BP1Q12888 1972 aaPredicted RBP18.57■□□□□ 0.56
SSBP4-207ENST00000600244 LRRK2Q5S007 2527 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 H3BQV1 296 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 STX6O43752 255 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 TLR5O60602 858 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 TBX18O95935 607 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 MPOP05164 745 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 EPHX1P07099 455 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 PDIA4P13667 645 aaKnown RBP18.57■□□□□ 0.56
SSBP4-207ENST00000600244 ACP1P24666 158 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 EPHA8P29322 1005 aaPredicted RBP18.57■□□□□ 0.56
SSBP4-207ENST00000600244 E2F5Q15329 346 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 SFMBT2Q5VUG0 894 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 Q6ZNB5 142 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 KANSL1Q7Z3B3 1105 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 KRI1Q8N9T8 703 aaKnown RBP18.57■□□□□ 0.56
SSBP4-207ENST00000600244 SLC6A18Q96N87 628 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 NACA2Q9H009 215 aa18.57■□□□□ 0.56
SSBP4-207ENST00000600244 RBAKQ9NYW8 714 aaPredicted RBP18.57■□□□□ 0.56
SSBP4-207ENST00000600244 TULP1O00294 542 aaPredicted RBP18.56■□□□□ 0.56
SSBP4-207ENST00000600244 LSSP48449 732 aa18.56■□□□□ 0.56
SSBP4-207ENST00000600244 E2F1Q01094 437 aa18.56■□□□□ 0.56
SSBP4-207ENST00000600244 GRIN1Q05586 938 aa18.56■□□□□ 0.56
SSBP4-207ENST00000600244 BNIP3Q12983 259 aa18.56■□□□□ 0.56
SSBP4-207ENST00000600244 FYB2Q5VWT5 728 aa18.56■□□□□ 0.56
SSBP4-207ENST00000600244 ATG14Q6ZNE5 492 aa18.56■□□□□ 0.56
SSBP4-207ENST00000600244 SAAL1Q96ER3 474 aa18.56■□□□□ 0.56
SSBP4-207ENST00000600244 DPEP3Q9H4B8 488 aa18.56■□□□□ 0.56
SSBP4-207ENST00000600244 ZHX3Q9H4I2 956 aa18.56■□□□□ 0.56
SSBP4-207ENST00000600244 PDE11AQ9HCR9 933 aa18.56■□□□□ 0.56
SSBP4-207ENST00000600244 ASCL3Q9NQ33 180 aa18.56■□□□□ 0.56
SSBP4-207ENST00000600244 COMMD8Q9NX08 183 aa18.56■□□□□ 0.56
SSBP4-207ENST00000600244 LSM7Q9UK45 103 aaKnown RBP18.56■□□□□ 0.56
SSBP4-207ENST00000600244 A0A1W2PPC4 97 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 TACC1O75410 805 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 PPP1R37O75864 691 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 FAM163BP0C2L3 166 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 RXRGP48443 463 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 SLC5A3P53794 718 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 EIF4HQ15056 248 aaKnown RBP18.55■□□□□ 0.56
SSBP4-207ENST00000600244 TMEM215Q68D42 235 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 KIAA0895LQ68EN5 471 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 ZNF720Q7Z2F6 126 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 SORCS1Q8WY21 1168 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 CDK5RAP3Q96JB5 506 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 STRA6Q9BX79 667 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 EBF2Q9HAK2 575 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 SGK2Q9HBY8 427 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.55■□□□□ 0.56
SSBP4-207ENST00000600244 STARD5Q9NSY2 213 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 INTS13Q9NVM9 706 aa18.55■□□□□ 0.56
SSBP4-207ENST00000600244 PLXNA2O75051 1894 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 BOD1L1Q8NFC6 3051 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 A0A1W2PR77 199 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 VPS37CA5D8V6 355 aaPredicted RBP18.54■□□□□ 0.56
SSBP4-207ENST00000600244 SUV39H1O43463 412 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 LDHAP00338 332 aaKnown RBP18.54■□□□□ 0.56
SSBP4-207ENST00000600244 TMEM191BP0C7N4 346 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 RPS14P62263 151 aaKnown RBP18.54■□□□□ 0.56
SSBP4-207ENST00000600244 GABREP78334 506 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 SKOR1P84550 965 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 ZBTB16Q05516 673 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 KCNA1Q09470 495 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 PKP1Q13835 747 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 PROX2Q3B8N5 592 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 CDCP2Q5VXM1 449 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 SERPINA13PQ6UXR4 307 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 OR5B17Q8NGF7 314 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 SKA1Q96BD8 255 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 HVCN1Q96D96 273 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 MMS19Q96T76 1030 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.54■□□□□ 0.56
SSBP4-207ENST00000600244 SNX25Q9H3E2 840 aa18.54■□□□□ 0.56
SSBP4-207ENST00000600244 CYLDQ9NQC7 956 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms