RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 CTDSP2O14595 271 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 IFIT3O14879 490 aaKnown RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 PCDH17O14917 1159 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 CETN3O15182 167 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 CD3EAPO15446 510 aaKnown RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 POLR2DO15514 142 aaKnown RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 SPINT1O43278 529 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 KCNQ3O43525 872 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 SPOPO43791 374 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 EIF4EBP3O60516 100 aaPredicted RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 BUB1BO60566 1050 aaPredicted RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 ZC3H11AO75152 810 aaKnown RBP eCLIP5.51□□□□□ -1.53
PAF1-208ENST00000598594 GUCY1B2O75343 617 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 YEATS4O95619 227 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 NPPAP01160 153 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 AHSGP02765 367 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 HMGCRP04035 888 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 TUBBP07437 444 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 SYN1P17600 705 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 JAK1P23458 1154 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 PTPN3P26045 913 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 IL1R2P27930 398 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 ICAM3P32942 547 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 CCR10P46092 362 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 ARL4DP49703 201 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 VPS41P49754 854 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 LIG4P49917 911 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 SOX8P57073 446 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 TUBB4BP68371 445 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 ZNF200P98182 395 aaPredicted RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 TNP2Q05952 138 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 SPIRE1Q08AE8 756 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 GPS1Q13098 491 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 AIMP2Q13155 320 aaKnown RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 DGKDQ16760 1214 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 CCDC152Q4G0S7 254 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 ANKRD20A4Q4UJ75 823 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 SLC44A4Q53GD3 710 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 ANKRD20A8PQ5CZ79 823 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 DNTTIP2Q5QJE6 756 aaKnown RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 ANKRD20A2Q5SQ80 823 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 CATSPEREQ5SY80 951 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 ANKRD20A1Q5TYW2 823 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 ANKRD20A3Q5VUR7 823 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 MTHFD1LQ6UB35 978 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 LRIG3Q6UXM1 1119 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 MSANTD1Q6ZTZ1 278 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 CCDC80Q76M96 950 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 CHST9Q7L1S5 443 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 KRT28Q7Z3Y7 464 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 TMC3Q7Z5M5 1100 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 TAF8Q7Z7C8 310 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 DSG4Q86SJ6 1040 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 FAM83AQ86UY5 434 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 HOOK3Q86VS8 718 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 AADATQ8N5Z0 425 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 NIPA2Q8N8Q9 360 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 SLC4A11Q8NBS3 891 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 GLB1L3Q8NCI6 653 aaPredicted RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 METTL21AQ8WXB1 218 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 RSC1A1Q92681 617 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 SPACA9Q96E40 222 aaPredicted RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 FBXL18Q96ME1 805 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 NR1H4Q96RI1 486 aaPredicted RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 TUBGCP5Q96RT8 1024 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 MMP19Q99542 508 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 PHF7Q9BWX1 381 aaPredicted RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 ASPNQ9BXN1 380 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 NFKBIZQ9BYH8 718 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 PUS3Q9BZE2 481 aaKnown RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 ZNF518BQ9C0D4 1074 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.51□□□□□ -1.53
PAF1-208ENST00000598594 SMG9Q9H0W8 520 aaKnown RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 WDCPQ9H6R7 721 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 MAGEE1Q9HCI5 957 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 HEYLQ9NQ87 328 aaPredicted RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 RPRD1BQ9NQG5 326 aaKnown RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 CHST7Q9NS84 486 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 DNAJB12Q9NXW2 375 aaKnown RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 ZNF70Q9UC06 446 aaPredicted RBP5.51□□□□□ -1.53
PAF1-208ENST00000598594 TUBE1Q9UJT0 475 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 HCN2Q9UL51 889 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 TNFSF13BQ9Y275 285 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 KCNK7Q9Y2U2 307 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 NAALAD2Q9Y3Q0 740 aa5.51□□□□□ -1.53
PAF1-208ENST00000598594 CENPJQ9HC77 1338 aaPredicted RBP5.5□□□□□ -1.53
PAF1-208ENST00000598594 NPHP3-ACAD11A0A0J9YXS1 232 aa5.5□□□□□ -1.53
PAF1-208ENST00000598594 FRMD3A2A2Y4 597 aa5.5□□□□□ -1.53
PAF1-208ENST00000598594 TMEM233B4DJY2 109 aa5.5□□□□□ -1.53
PAF1-208ENST00000598594 GMFGO60234 142 aa5.5□□□□□ -1.53
PAF1-208ENST00000598594 PPP6R2O75170 966 aa5.5□□□□□ -1.53
PAF1-208ENST00000598594 ERLIN1O75477 346 aa5.5□□□□□ -1.53
PAF1-208ENST00000598594 ALDH1A2O94788 518 aa5.5□□□□□ -1.53
PAF1-208ENST00000598594 LETM1O95202 739 aaPredicted RBP5.5□□□□□ -1.53
PAF1-208ENST00000598594 DIRAS3O95661 229 aa5.5□□□□□ -1.53
PAF1-208ENST00000598594 TFRCP02786 760 aaKnown RBP5.5□□□□□ -1.53
PAF1-208ENST00000598594 S100A9P06702 114 aaKnown RBP5.5□□□□□ -1.53
PAF1-208ENST00000598594 GLI1P08151 1106 aa5.5□□□□□ -1.53
PAF1-208ENST00000598594 LTA4HP09960 611 aaKnown RBP5.5□□□□□ -1.53
PAF1-208ENST00000598594 ZNF853P0CG23 659 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms