RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 KCTD13Q8WZ19 329 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 TCEAL3Q969E4 200 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 ZC3H10Q96K80 434 aaKnown RBP14.39□□□□□ -0.11
SCAF1-203ENST00000598359 MIS12Q9H081 205 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 CLSTN2Q9H4D0 955 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 BCCIPQ9P287 314 aaKnown RBP eCLIP14.39□□□□□ -0.11
SCAF1-203ENST00000598359 RALYQ9UKM9 306 aaKnown RBP14.39□□□□□ -0.11
SCAF1-203ENST00000598359 CLEC4EQ9ULY5 219 aa14.39□□□□□ -0.11
SCAF1-203ENST00000598359 PRR5-ARHGAP8B1AHC4 643 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 ALDH1A2O94788 518 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 FGFR1OPO95684 399 aaKnown RBP14.38□□□□□ -0.11
SCAF1-203ENST00000598359 SLC9A1P19634 815 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 MPLP40238 635 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 ARHGAP8P85298 464 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 CREB5Q02930 508 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 ELF2Q15723 593 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 HSF5Q4G112 596 aaPredicted RBP14.38□□□□□ -0.11
SCAF1-203ENST00000598359 HSP90AA4PQ58FG1 418 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 DENND1BQ6P3S1 775 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 RNF139Q8WU17 664 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 LOXL4Q96JB6 756 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 RTKNQ9BST9 563 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 DCLK3Q9C098 648 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 POLMQ9NP87 494 aaPredicted RBP14.38□□□□□ -0.11
SCAF1-203ENST00000598359 CACNA2D2Q9NY47 1150 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 ZNF510Q9Y2H8 683 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 RAD54BQ9Y620 910 aa14.38□□□□□ -0.11
SCAF1-203ENST00000598359 A0A1W2PQF6 199 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 WASH3PC4AMC7 463 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 PENKP01210 267 aaPredicted RBP14.37□□□□□ -0.11
SCAF1-203ENST00000598359 HOXB2P14652 356 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 GABRG2P18507 467 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 NTSR1P30989 418 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 COL9A2Q14055 689 aaPredicted RBP14.37□□□□□ -0.11
SCAF1-203ENST00000598359 TRIP4Q15650 581 aaPredicted RBP14.37□□□□□ -0.11
SCAF1-203ENST00000598359 ARHGAP44Q17R89 818 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 GEN1Q17RS7 908 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 DPCR1Q3MIW9 517 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 PREPLQ4J6C6 727 aaPredicted RBP14.37□□□□□ -0.11
SCAF1-203ENST00000598359 AASDHQ4L235 1098 aaPredicted RBP14.37□□□□□ -0.11
SCAF1-203ENST00000598359 KIAA1211LQ6NV74 962 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 CHPFQ8IZ52 775 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 OLIG1Q8TAK6 271 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 PLD4Q96BZ4 506 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 SLC6A17Q9H1V8 727 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 CNGB3Q9NQW8 809 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 ST7Q9NRC1 585 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 ABCC13Q9NSE7 274 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 OLA1Q9NTK5 396 aaKnown RBP14.37□□□□□ -0.11
SCAF1-203ENST00000598359 MBD1Q9UIS9 605 aaPredicted RBP14.37□□□□□ -0.11
SCAF1-203ENST00000598359 FBXO10Q9UK96 956 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 AJAP1Q9UKB5 411 aaPredicted RBP14.37□□□□□ -0.11
SCAF1-203ENST00000598359 STARD13Q9Y3M8 1113 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 SPAG17Q6Q759 2223 aa14.37□□□□□ -0.11
SCAF1-203ENST00000598359 CNOT1A5YKK6 2376 aaKnown RBP14.36□□□□□ -0.11
SCAF1-203ENST00000598359 RHOBTB1O94844 696 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 ZNF806P0C7X5 589 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 USP8P40818 1118 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 P2RY2P41231 377 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 MTIF2P46199 727 aaKnown RBP14.36□□□□□ -0.11
SCAF1-203ENST00000598359 MFAP3P55082 362 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 STILQ15468 1287 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 TPD52L1Q16890 204 aaPredicted RBP14.36□□□□□ -0.11
SCAF1-203ENST00000598359 PLA2G2CQ5R387 149 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 PMS2CLQ68D20 193 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 TRIM65Q6PJ69 517 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 RBM43Q6ZSC3 357 aaKnown RBP14.36□□□□□ -0.11
SCAF1-203ENST00000598359 NUDT18Q6ZVK8 323 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 ARMCX6Q7L4S7 300 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 TRMT11Q7Z4G4 463 aaKnown RBP14.36□□□□□ -0.11
SCAF1-203ENST00000598359 SCUBE3Q8IX30 993 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 C12orf50Q8NA57 414 aaPredicted RBP14.36□□□□□ -0.11
SCAF1-203ENST00000598359 MLKLQ8NB16 471 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 DDI1Q8WTU0 396 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 FUCA2Q9BTY2 467 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 TSPY26PQ9H489 355 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 CYTH4Q9UIA0 394 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 CNTN6Q9UQ52 1028 aa14.36□□□□□ -0.11
SCAF1-203ENST00000598359 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 GOLGA6L7A0A1B0GV03 622 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 BCLAF3A2AJT9 711 aaKnown RBP14.35□□□□□ -0.11
SCAF1-203ENST00000598359 BECN2A8MW95 431 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 THAP12O43422 761 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 LTFP02788 710 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 FYNP06241 537 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 CHKAP35790 457 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 GPD2P43304 727 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 DHPSP49366 369 aaPredicted RBP14.35□□□□□ -0.11
SCAF1-203ENST00000598359 HARS2P49590 506 aaKnown RBP14.35□□□□□ -0.11
SCAF1-203ENST00000598359 SGSHP51688 502 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 MAP7D1Q3KQU3 841 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 FAM217AQ8IXS0 508 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 TMEFF1Q8IYR6 380 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 SCML4Q8N228 414 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 DEFB119Q8N690 84 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 NETO1Q8TDF5 533 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 KCNV2Q8TDN2 545 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 IPO4Q8TEX9 1081 aaKnown RBP14.35□□□□□ -0.11
SCAF1-203ENST00000598359 SORCS1Q8WY21 1168 aa14.35□□□□□ -0.11
SCAF1-203ENST00000598359 PIWIL1Q96J94 861 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms