RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 ADORA2BP29275 332 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 PLA2G4AP47712 749 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 ENPP2Q13822 863 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 KNOP1Q1ED39 458 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 SPOPLQ6IQ16 392 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 CLEC20AQ6ZU45 233 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 C1orf216Q8TAB5 229 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 HNRNPLLQ8WVV9 542 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 JAKMIP2Q96AA8 810 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 MIR1-1HGQ9H1L0 117 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 DMAC2Q9NW81 257 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 THAP10Q9P2Z0 257 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 CLEC4EQ9ULY5 219 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 FNDC3AQ9Y2H6 1198 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 SLC27A6Q9Y2P4 619 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 RAXQ9Y2V3 346 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 SLCO1B1Q9Y6L6 691 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 METTL12A8MUP2 240 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 PENKP01210 267 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 TPMTP51580 245 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 MFAP3P55082 362 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 CUL4BQ13620 913 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 DCAF12L1Q5VU92 463 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 FYB2Q5VWT5 728 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 KLHDC10Q6PID8 442 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 DBX2Q6ZNG2 339 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 TMPRSS6Q8IU80 811 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 CADM4Q8NFZ8 388 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 SETD7Q8WTS6 366 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 BBC3Q96PG8 261 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 GAREM1Q9H706 876 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 KIAA1522Q9P206 1035 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 CGNQ9P2M7 1197 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 DNMT3LQ9UJW3 386 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 APOBEC2Q9Y235 224 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 NFE2L3Q9Y4A8 694 aa17.3■□□□□ 0.36
SHKBP1-215ENST00000597649 MEI4A8MW99 385 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 CILPO75339 1184 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 CLSTN1O94985 981 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 SMC2O95347 1197 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 ATXN1LP0C7T5 689 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 FAM200BP0CF97 657 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 ASPAP45381 313 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 KIF11P52732 1056 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 COPAP53621 1224 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 AP3M2P53677 418 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 SGSM1Q2NKQ1 1148 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 HLA-BQ31612 363 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 ZACNQ401N2 412 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 C10orf120Q5SQS8 335 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 C1orf220Q5T0J3 134 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 UNC93AQ86WB7 457 aa17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 RBBP8NLQ8NC74 664 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 BAHD1Q8TBE0 780 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 PIWIL1Q96J94 861 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 HNRNPABQ99729 332 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-215ENST00000597649 PVALEFA0A1B0GWK0 134 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 BCAT2O15382 392 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 DKK1O94907 266 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 GOLGA8FQ08AF8 430 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 GOLGA8DPQ0D2H9 430 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 STARD3Q14849 445 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 TMEM215Q68D42 235 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 SV2AQ7L0J3 742 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 TMPRSS7Q7RTY8 843 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 ELOA2Q8IYF1 753 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 SORCS1Q8WY21 1168 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 CYFIP2Q96F07 1278 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 SIPA1Q96FS4 1042 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 TM7SF3Q9NS93 570 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 EXOC1Q9NV70 894 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 EIF2B4Q9UI10 523 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 KNTC1P50748 2209 aa17.28■□□□□ 0.36
SHKBP1-215ENST00000597649 NUMA1Q14980 2115 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 A0A1B0GVT2 93 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 ASS1P00966 412 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 IGLV3-19P01714 112 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 RPN1P04843 607 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 PRR29P0C7W0 189 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 ZNF883P0CG24 379 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 P4HA1P13674 534 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 MATKP42679 507 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 STK4Q13043 487 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 PNOCQ13519 176 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 ZNF234Q14588 700 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 CAMK4Q16566 473 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 ZNF276Q8N554 614 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 GPT2Q8TD30 523 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 APOBEC3GQ9HC16 384 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 ELOVL2Q9NXB9 296 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 NAGPAQ9UK23 515 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 BTBD3Q9Y2F9 522 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 PCDHA5Q9Y5H7 936 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 PTPRBP23467 1997 aa17.27■□□□□ 0.36
SHKBP1-215ENST00000597649 KLRC4O43908 158 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 HMBSP08397 361 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 PRKCHP24723 683 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 OXTRP30559 389 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 CSNK1EP49674 416 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms