RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 EDEM1Q92611 657 aa18.73■□□□□ 0.59
CHMP2A-203ENST00000597209 SPACA7Q96KW9 195 aa18.73■□□□□ 0.59
CHMP2A-203ENST00000597209 CD248Q9HCU0 757 aa18.73■□□□□ 0.59
CHMP2A-203ENST00000597209 SFMBT1Q9UHJ3 866 aa18.73■□□□□ 0.59
CHMP2A-203ENST00000597209 INVSQ9Y283 1065 aa18.73■□□□□ 0.59
CHMP2A-203ENST00000597209 MYO18AQ92614 2054 aaKnown RBP18.73■□□□□ 0.59
CHMP2A-203ENST00000597209 PLXND1Q9Y4D7 1925 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 GTPBP10A4D1E9 387 aaKnown RBP18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 GDF9O60383 454 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 BCKDHBP21953 392 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 GPD2P43304 727 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 MFAP3P55082 362 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 SF3A2Q15428 464 aaKnown RBP18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 MAP7D1Q3KQU3 841 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 AASDHQ4L235 1098 aaPredicted RBP18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 MPPE1Q53F39 396 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 TRIM65Q6PJ69 517 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 CLEC17AQ6ZS10 378 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 CHPFQ8IZ52 775 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 STK32AQ8WU08 396 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 BHMTQ93088 406 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 PIWIL1Q96J94 861 aaKnown RBP18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 ACOX2Q99424 681 aa18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 IRX2Q9BZI1 471 aaPredicted RBP18.72■□□□□ 0.59
CHMP2A-203ENST00000597209 MED7O43513 233 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 CAVIN2O95810 425 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 CALCAP01258 141 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 LTFP02788 710 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 KRT5P13647 590 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 GABRG2P18507 467 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 WASP42768 502 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 ACADSBP45954 432 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 CREB5Q02930 508 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 CCDC6Q16204 474 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 GBP6Q6ZN66 633 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 PGBD3Q8N328 593 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 IPO4Q8TEX9 1081 aaKnown RBP18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 UCMAQ8WVF2 138 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 GOLGA1Q92805 767 aa18.71■□□□□ 0.59
CHMP2A-203ENST00000597209 MED19A0JLT2 244 aaPredicted RBP18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 ZBTB24O43167 697 aaPredicted RBP18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 SART1O43290 800 aaKnown RBP18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 IGLV3-27P01718 113 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 RING1Q06587 406 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 ENPP2Q13822 863 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 EIF4HQ15056 248 aaKnown RBP18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 ADGRF1Q5T601 910 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 BEND5Q7L4P6 421 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 LPCAT2Q7L5N7 544 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 ANKS1BQ7Z6G8 1248 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 UNC45BQ8IWX7 931 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 DDI1Q8WTU0 396 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 ZNF606Q8WXB4 792 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 RLN3Q8WXF3 142 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 DDX1Q92499 740 aaKnown RBP18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 AZIN2Q96A70 460 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 CRACR2AQ9BSW2 395 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 SLC4A5Q9BY07 1137 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 THAP9Q9H5L6 903 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 THAP10Q9P2Z0 257 aaPredicted RBP18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 MBD1Q9UIS9 605 aaPredicted RBP18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 DNAH14Q0VDD8 3507 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 THADAQ6YHU6 1953 aa18.7■□□□□ 0.58
CHMP2A-203ENST00000597209 SDK1Q7Z5N4 2213 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 DCDC2BA2VCK2 349 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 MAP3K13O43283 966 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 TIMM44O43615 452 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 ZNF217O75362 1048 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 PRKCSHP14314 528 aaPredicted RBP18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 SLC9A1P19634 815 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 ERCC5P28715 1186 aaPredicted RBP18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 DPP6P42658 865 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 EXOC3L4Q17RC7 722 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 GEN1Q17RS7 908 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 NUGGCQ68CJ6 796 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 SLC36A4Q6YBV0 504 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 CREBRFQ8IUR6 639 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 TMA16Q96EY4 203 aaKnown RBP18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 APEX2Q9UBZ4 518 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 CLEC4EQ9ULY5 219 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 STON1Q9Y6Q2 735 aa18.69■□□□□ 0.58
CHMP2A-203ENST00000597209 ABCA7Q8IZY2 2146 aa18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 PIK3R2O00459 728 aa18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 TM4SF5O14894 197 aa18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 MSI1O43347 362 aaKnown RBP18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 LETM1O95202 739 aaPredicted RBP18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 FYNP06241 537 aa18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 PON1P27169 355 aa18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 HOXD9P28356 352 aaPredicted RBP18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 GNA15P30679 374 aa18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 DHPSP49366 369 aaPredicted RBP18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 NNTQ13423 1086 aa18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 TPD52L1Q16890 204 aaPredicted RBP18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 CT47A1Q5JQC4 288 aaPredicted RBP18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 MPP7Q5T2T1 576 aa18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 RNF43Q68DV7 783 aa18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 KIAA1211LQ6NV74 962 aa18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 DENND1BQ6P3S1 775 aa18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 CYP2U1Q7Z449 544 aa18.68■□□□□ 0.58
CHMP2A-203ENST00000597209 TMEM110Q86TL2 294 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms