RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 HNRNPA1P09651 372 aaKnown RBP eCLIP15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 IL4RP24394 825 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 CETN2P41208 172 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 EPHA5P54756 1037 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 CDH6P55285 790 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 SEMA3BQ13214 749 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 KLF1Q13351 362 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 KCNC3Q14003 757 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 DPYSL3Q14195 570 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 TRIP4Q15650 581 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 TFDP3Q5H9I0 405 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 HECTD3Q5T447 861 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 SND1Q7KZF4 910 aaKnown RBP eCLIP15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 RSRC2Q7L4I2 434 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 CCDC50Q8IVM0 306 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 HS6ST3Q8IZP7 471 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 KCTD6Q8NC69 237 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 MRPL38Q96DV4 380 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 FCRL2Q96LA5 508 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 ZNF512Q96ME7 567 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 MAGEB5Q9BZ81 275 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 TMPRSS4Q9NRS4 437 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 TLR6Q9Y2C9 796 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 NR2E1Q9Y466 385 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 HCFC2Q9Y5Z7 792 aa15.31■□□□□ 0.04
SHKBP1-211ENST00000595945 KCNU1A8MYU2 1149 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 RFXAPO00287 272 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 CCL16O15467 120 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 OAS1P00973 400 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 RING1Q06587 406 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 ADCY2Q08462 1091 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 EFEMP1Q12805 493 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 PABPC1LQ4VXU2 614 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 C10orf120Q5SQS8 335 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 GAREM2Q75VX8 874 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 TADA2BQ86TJ2 420 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 ELMOD1Q8N336 334 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 MMGT1Q8N4V1 131 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 MYRIPQ8NFW9 859 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 CDCA3Q99618 268 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 ZNF670Q9BS34 389 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 DHX35Q9H5Z1 703 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 WDCPQ9H6R7 721 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 RBM12Q9NTZ6 932 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 ZDHHC7Q9NXF8 308 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 MARCH2Q9P0N8 246 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 RCOR3Q9P2K3 495 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 DPP7Q9UHL4 492 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 RASAL2Q9UJF2 1139 aa15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 HBS1LQ9Y450 684 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-211ENST00000595945 A0A1W2PPC1 479 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 COCHO43405 550 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 RFPL2O75678 378 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 OLFM2O95897 454 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 KRT10P13645 584 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 CCR1P32246 355 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 ATP5C1P36542 298 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 KPNA1P52294 538 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 TBX4P57082 545 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 C2orf54Q08AI8 447 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 KRT81Q14533 505 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 CYP1B1Q16678 543 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 LRIT3Q3SXY7 679 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 ARL13BQ3SXY8 428 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 EFHC2Q5JST6 749 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 ZFYVE27Q5T4F4 411 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 ARTNQ5T4W7 220 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 BBS12Q6ZW61 710 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 MAP7D3Q8IWC1 876 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 PYROXD2Q8N2H3 581 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 PRELID2Q8N945 189 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 VN1R2Q8NFZ6 395 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 MAIP1Q8WWC4 291 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 ZNF707Q96C28 371 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 RNF157Q96PX1 679 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 HEMGNQ9BXL5 484 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 AP1M1Q9BXS5 423 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 TKTL2Q9H0I9 626 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 OSBPL2Q9H1P3 480 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 TLE6Q9H808 572 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 DNMT3LQ9UJW3 386 aa15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 NUP210Q8TEM1 1887 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-211ENST00000595945 CHD5Q8TDI0 1954 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 SLC12A8A0AV02 714 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 C2orf78A6NCI8 922 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 EFCAB8A8MWE9 144 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 CCDC188H7C350 402 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 KRIT1O00522 736 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 NRG2O14511 850 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 SLC2A3P11169 496 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 GABRR2P28476 465 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 CDC25CP30307 473 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 NRIP1P48552 1158 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 HCAR3P49019 387 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 NRG1Q02297 640 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 MMRN1Q13201 1228 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 LLGL1Q15334 1064 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 ODF2Q5BJF6 829 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 RBM23Q86U06 439 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms