RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 DLL3Q9NYJ7 618 aa16.73■□□□□ 0.27
IRF3-210ENST00000595240 CYTH4Q9UIA0 394 aa16.73■□□□□ 0.27
IRF3-210ENST00000595240 PRR5-ARHGAP8B1AHC4 643 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 SART1O43290 800 aaKnown RBP16.72■□□□□ 0.27
IRF3-210ENST00000595240 THAP12O43422 761 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 LATS1O95835 1130 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 CYBBP04839 570 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 FYNP06241 537 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 NTSR1P30989 418 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 ACADSBP45954 432 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 ARHGAP8P85298 464 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 ARHGAP44Q17R89 818 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 VWA3BQ502W6 1294 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 HSP90AA4PQ58FG1 418 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 RBM43Q6ZSC3 357 aaKnown RBP16.72■□□□□ 0.27
IRF3-210ENST00000595240 TMEM110Q86TL2 294 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 SCUBE3Q8IX30 993 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 GOLGA1Q92805 767 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 ACOX2Q99424 681 aa16.72■□□□□ 0.27
IRF3-210ENST00000595240 AJAP1Q9UKB5 411 aaPredicted RBP16.72■□□□□ 0.27
IRF3-210ENST00000595240 A0A1W2PQF6 199 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 TCRBV21S2A2A0A5A6 115 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 PRKCSHP14314 528 aaPredicted RBP16.71■□□□□ 0.27
IRF3-210ENST00000595240 HOXB2P14652 356 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 USP8P40818 1118 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 ZNF445P59923 1031 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 RING1Q06587 406 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 ELF2Q15723 593 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 RSPO4Q2I0M5 234 aaPredicted RBP16.71■□□□□ 0.27
IRF3-210ENST00000595240 ADGRF1Q5T601 910 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 DPY19L2P1Q6NXN4 242 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 PRR23CQ6ZRP0 262 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 BEND5Q7L4P6 421 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 C11orf74Q86VG3 221 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 CHPFQ8IZ52 775 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 PIWIL1Q96J94 861 aaKnown RBP16.71■□□□□ 0.27
IRF3-210ENST00000595240 GABRG3Q99928 467 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 CD248Q9HCU0 757 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 ST7Q9NRC1 585 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 SAMSN1Q9NSI8 373 aaKnown RBP16.71■□□□□ 0.27
IRF3-210ENST00000595240 DNAJC12Q9UKB3 198 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 INVSQ9Y283 1065 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 PCDHGA5Q9Y5G8 931 aa16.71■□□□□ 0.27
IRF3-210ENST00000595240 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.71■□□□□ 0.27
IRF3-210ENST00000595240 KCNJ18B7U540 433 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 E5RJQ4 531 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 PAPSS1O43252 624 aaPredicted RBP16.7■□□□□ 0.26
IRF3-210ENST00000595240 FOXD2O60548 495 aaPredicted RBP16.7■□□□□ 0.26
IRF3-210ENST00000595240 RHOBTB1O94844 696 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 NCAM1P13591 858 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 HOXD9P28356 352 aaPredicted RBP16.7■□□□□ 0.26
IRF3-210ENST00000595240 P2RY2P41231 377 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 WASP42768 502 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 PDCLQ13371 301 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 KCNJ12Q14500 433 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 PUM1Q14671 1186 aaKnown RBP eCLIP16.7■□□□□ 0.26
IRF3-210ENST00000595240 GEN1Q17RS7 908 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 MPPE1Q53F39 396 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 NUGGCQ68CJ6 796 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 DDI1Q8WTU0 396 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 HMGB4Q8WW32 186 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 SLC2A11Q9BYW1 496 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 ARRDC1-AS1Q9H2J1 176 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 CLEC4EQ9ULY5 219 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 NFE2L3Q9Y4A8 694 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 SDK1Q7Z5N4 2213 aa16.7■□□□□ 0.26
IRF3-210ENST00000595240 EML5Q05BV3 1969 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 FOXN3O00409 490 aaPredicted RBP16.69■□□□□ 0.26
IRF3-210ENST00000595240 GABRG2P18507 467 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 SDHBP21912 280 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 BCKDHBP21953 392 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 EEF1GP26641 437 aaKnown RBP16.69■□□□□ 0.26
IRF3-210ENST00000595240 GBP1P32455 592 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 TBX4P57082 545 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 PTK2Q05397 1052 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 NNTQ13423 1086 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 TCP11X2Q5H9J9 407 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 PLA2G2CQ5R387 149 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 PMS2CLQ68D20 193 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 SDE2Q6IQ49 451 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 ERMP1Q7Z2K6 904 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 ANKS1BQ7Z6G8 1248 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 UNC45BQ8IWX7 931 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 FAM71AQ8IYT1 594 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 WDTC1Q8N5D0 677 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 ENOX1Q8TC92 643 aaKnown RBP16.69■□□□□ 0.26
IRF3-210ENST00000595240 DQX1Q8TE96 717 aaKnown RBP16.69■□□□□ 0.26
IRF3-210ENST00000595240 FAM149B1Q96BN6 582 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 TRIM62Q9BVG3 475 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 LHX5Q9H2C1 402 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 BCCIPQ9P287 314 aaKnown RBP eCLIP16.69■□□□□ 0.26
IRF3-210ENST00000595240 PCDHGC3Q9UN70 934 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 NAALADL1Q9UQQ1 740 aa16.69■□□□□ 0.26
IRF3-210ENST00000595240 TSPAN3O60637 253 aa16.68■□□□□ 0.26
IRF3-210ENST00000595240 ZNF806P0C7X5 589 aa16.68■□□□□ 0.26
IRF3-210ENST00000595240 MPLP40238 635 aa16.68■□□□□ 0.26
IRF3-210ENST00000595240 SLC11A2P49281 568 aa16.68■□□□□ 0.26
IRF3-210ENST00000595240 KCNMA1Q12791 1236 aa16.68■□□□□ 0.26
IRF3-210ENST00000595240 CCDC6Q16204 474 aa16.68■□□□□ 0.26
IRF3-210ENST00000595240 MAP7D1Q3KQU3 841 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms