RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 SLC11A2P49281 568 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 PDCLQ13371 301 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 USP39Q53GS9 565 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 HSP90AA4PQ58FG1 418 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 FKBP15Q5T1M5 1219 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 CDKAL1Q5VV42 579 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 FYB2Q5VWT5 728 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 ERMP1Q7Z2K6 904 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 UCMAQ8WVF2 138 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 AZIN2Q96A70 460 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 FAM149B1Q96BN6 582 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 SFMBT1Q9UHJ3 866 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 FBXO10Q9UK96 956 aa18.5■□□□□ 0.55
SHKBP1-204ENST00000594862 PIK3R2O00459 728 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 CAPN9O14815 690 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 IRAK2O43187 625 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 GABBR2O75899 941 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 CALCAP01258 141 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 IGLV3-27P01718 113 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 GLI1P08151 1106 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 CHRM1P11229 460 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 NCAM1P13591 858 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 SDHBP21912 280 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 NTSR1P30989 418 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 KRT9P35527 623 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 PXNP49023 591 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 MYL5Q02045 173 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 LMNB2Q03252 620 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 MESP2Q0VG99 397 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 BYSLQ13895 437 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 EIF4HQ15056 248 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 ELF2Q15723 593 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 ADGRF1Q5T601 910 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 SCUBE3Q8IX30 993 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 FAM71AQ8IYT1 594 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 IPO4Q8TEX9 1081 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 DDI1Q8WTU0 396 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 ZC3H10Q96K80 434 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 NAT10Q9H0A0 1025 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 PLCB1Q9NQ66 1216 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 ATG2BQ96BY7 2078 aa18.49■□□□□ 0.55
SHKBP1-204ENST00000594862 TYW5A2RUC4 315 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 E5RJQ4 531 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 SGK1O00141 431 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 GFRA2O00451 464 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 TBX4P57082 545 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 SRSF5Q13243 272 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 RAPGEF1Q13905 1077 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 KLHDC7AQ5VTJ3 777 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 ANO7Q6IWH7 933 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 ANKS1BQ7Z6G8 1248 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 KIAA2013Q8IYS2 634 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 FAM160A2Q8N612 972 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 DQX1Q8TE96 717 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 CLEC4CQ8WTT0 213 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 SPACA7Q96KW9 195 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 POPDC2Q9HBU9 364 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 ASNSD1Q9NWL6 643 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 TAB2Q9NYJ8 693 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 TLR6Q9Y2C9 796 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 PCDHGA5Q9Y5G8 931 aa18.48■□□□□ 0.55
SHKBP1-204ENST00000594862 PRR5-ARHGAP8B1AHC4 643 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 FOXN3O00409 490 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 PAPSS1O43252 624 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 MSI1O43347 362 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 RHOBTB1O94844 696 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 CISD3P0C7P0 127 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 HOXB2P14652 356 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 HNRNPLP14866 589 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 UCHL3P15374 230 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 YWHAZP63104 245 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 ARHGAP8P85298 464 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 APBA1Q02410 837 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 MTA1Q13330 715 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 LPAL2Q16609 132 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 EFHC1Q5JVL4 640 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 MPP7Q5T2T1 576 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 TOGARAM2Q6ZUX3 1019 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 ZDHHC17Q8IUH5 632 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 SFTPA1Q8IWL2 248 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 CHPFQ8IZ52 775 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 DCLK2Q8N568 766 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 MDGA1Q8NFP4 955 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 BHMTQ93088 406 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 PPP1R13BQ96KQ4 1090 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 LSM14BQ9BX40 385 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 PDCL3Q9H2J4 239 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 PLK2Q9NYY3 685 aa18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 BCCIPQ9P287 314 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHKBP1-204ENST00000594862 GPR179Q6PRD1 2367 aa18.46■□□□□ 0.55
SHKBP1-204ENST00000594862 TIMM44O43615 452 aa18.46■□□□□ 0.55
SHKBP1-204ENST00000594862 HSF2BPO75031 334 aa18.46■□□□□ 0.55
SHKBP1-204ENST00000594862 EPN2O95208 641 aa18.46■□□□□ 0.55
SHKBP1-204ENST00000594862 APOEP02649 317 aa18.46■□□□□ 0.55
SHKBP1-204ENST00000594862 KCNMA1Q12791 1236 aa18.46■□□□□ 0.55
SHKBP1-204ENST00000594862 DRAP1Q14919 205 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-204ENST00000594862 KRT31Q15323 416 aa18.46■□□□□ 0.55
SHKBP1-204ENST00000594862 EMC10Q5UCC4 262 aa18.46■□□□□ 0.55
SHKBP1-204ENST00000594862 TMEM92Q6UXU6 159 aa18.46■□□□□ 0.55
SHKBP1-204ENST00000594862 MSANTD4Q8NCY6 345 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms