RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 A0A1W2PQF6 199 aa24.53■■□□□ 1.52
LSM4-204ENST00000594828 PIK3R2O00459 728 aa24.53■■□□□ 1.52
LSM4-204ENST00000594828 DHPSP49366 369 aaPredicted RBP24.53■■□□□ 1.52
LSM4-204ENST00000594828 LIMK1P53667 647 aa24.53■■□□□ 1.52
LSM4-204ENST00000594828 FRMD1Q8N878 549 aa24.53■■□□□ 1.52
LSM4-204ENST00000594828 DDI1Q8WTU0 396 aa24.53■■□□□ 1.52
LSM4-204ENST00000594828 IRGQQ8WZA9 623 aa24.53■■□□□ 1.52
LSM4-204ENST00000594828 HSFY1Q96LI6 401 aa24.53■■□□□ 1.52
LSM4-204ENST00000594828 CNTN6Q9UQ52 1028 aa24.53■■□□□ 1.52
LSM4-204ENST00000594828 MYO18AQ92614 2054 aaKnown RBP24.53■■□□□ 1.52
LSM4-204ENST00000594828 KRT5P13647 590 aa24.52■■□□□ 1.52
LSM4-204ENST00000594828 GABRG2P18507 467 aa24.52■■□□□ 1.52
LSM4-204ENST00000594828 MFAP3P55082 362 aa24.52■■□□□ 1.52
LSM4-204ENST00000594828 MAP7D1Q3KQU3 841 aa24.52■■□□□ 1.52
LSM4-204ENST00000594828 LPCAT2Q7L5N7 544 aa24.52■■□□□ 1.52
LSM4-204ENST00000594828 FAM217AQ8IXS0 508 aa24.52■■□□□ 1.52
LSM4-204ENST00000594828 GABRG3Q99928 467 aa24.52■■□□□ 1.52
LSM4-204ENST00000594828 GFRA2O00451 464 aa24.51■■□□□ 1.51
LSM4-204ENST00000594828 IL31Q6EBC2 164 aa24.51■■□□□ 1.51
LSM4-204ENST00000594828 TCEAL6Q6IPX3 200 aa24.51■■□□□ 1.51
LSM4-204ENST00000594828 CYP2U1Q7Z449 544 aa24.51■■□□□ 1.51
LSM4-204ENST00000594828 ABCA7Q8IZY2 2146 aa24.51■■□□□ 1.51
LSM4-204ENST00000594828 MLKLQ8NB16 471 aa24.51■■□□□ 1.51
LSM4-204ENST00000594828 IPO4Q8TEX9 1081 aaKnown RBP24.51■■□□□ 1.51
LSM4-204ENST00000594828 GOLGA1Q92805 767 aa24.51■■□□□ 1.51
LSM4-204ENST00000594828 TCEAL3Q969E4 200 aa24.51■■□□□ 1.51
LSM4-204ENST00000594828 MED15Q96RN5 788 aa24.51■■□□□ 1.51
LSM4-204ENST00000594828 CACNA2D2Q9NY47 1150 aa24.51■■□□□ 1.51
LSM4-204ENST00000594828 MBD1Q9UIS9 605 aaPredicted RBP24.51■■□□□ 1.51
LSM4-204ENST00000594828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 MSI1O43347 362 aaKnown RBP24.5■■□□□ 1.51
LSM4-204ENST00000594828 FBXO21O94952 628 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 LTFP02788 710 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 GEN1Q17RS7 908 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 MPPE1Q53F39 396 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 STPG1Q5TH74 334 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 KIAA1211LQ6NV74 962 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 MSANTD2Q6P1R3 559 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 ENOSF1Q7L5Y1 443 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 TMEFF1Q8IYR6 380 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 CLEC4CQ8WTT0 213 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 UCMAQ8WVF2 138 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 PIWIL1Q96J94 861 aaKnown RBP24.5■■□□□ 1.51
LSM4-204ENST00000594828 CRACR2AQ9BSW2 395 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 SLC2A11Q9BYW1 496 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 MIS12Q9H081 205 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 CALCOCO1Q9P1Z2 691 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 CLEC4EQ9ULY5 219 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 RAD54BQ9Y620 910 aa24.5■■□□□ 1.51
LSM4-204ENST00000594828 THADAQ6YHU6 1953 aa24.49■■□□□ 1.51
LSM4-204ENST00000594828 WASH3PC4AMC7 463 aa24.49■■□□□ 1.51
LSM4-204ENST00000594828 GPD2P43304 727 aa24.49■■□□□ 1.51
LSM4-204ENST00000594828 SPDYCQ5MJ68 293 aa24.49■■□□□ 1.51
LSM4-204ENST00000594828 DDX1Q92499 740 aaKnown RBP24.49■■□□□ 1.51
LSM4-204ENST00000594828 ERLEC1Q96DZ1 483 aa24.49■■□□□ 1.51
LSM4-204ENST00000594828 CD248Q9HCU0 757 aa24.49■■□□□ 1.51
LSM4-204ENST00000594828 STOML2Q9UJZ1 356 aa24.49■■□□□ 1.51
LSM4-204ENST00000594828 STON1Q9Y6Q2 735 aa24.49■■□□□ 1.51
LSM4-204ENST00000594828 CACNA1AO00555 2505 aa24.49■■□□□ 1.51
LSM4-204ENST00000594828 KHNYNO15037 678 aaKnown RBP24.48■■□□□ 1.51
LSM4-204ENST00000594828 NPC1O15118 1278 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 MED7O43513 233 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 TSPAN3O60637 253 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 LATS1O95835 1130 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 SLC9A1P19634 815 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 ZNF445P59923 1031 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 ADGRF1Q5T601 910 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 RNF43Q68DV7 783 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 TRIM65Q6PJ69 517 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 GBP6Q6ZN66 633 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 ANKS1BQ7Z6G8 1248 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 SCUBE3Q8IX30 993 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 PIGKQ92643 395 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 TMA16Q96EY4 203 aaKnown RBP24.48■■□□□ 1.51
LSM4-204ENST00000594828 FAM81BQ96LP2 452 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 ST7Q9NRC1 585 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 ELOVL2Q9NXB9 296 aa24.48■■□□□ 1.51
LSM4-204ENST00000594828 THAP10Q9P2Z0 257 aaPredicted RBP24.48■■□□□ 1.51
LSM4-204ENST00000594828 ZNF217O75362 1048 aa24.47■■□□□ 1.51
LSM4-204ENST00000594828 LETM1O95202 739 aaPredicted RBP24.47■■□□□ 1.51
LSM4-204ENST00000594828 NDUFV2P19404 249 aa24.47■■□□□ 1.51
LSM4-204ENST00000594828 PTGER3P43115 390 aa24.47■■□□□ 1.51
LSM4-204ENST00000594828 RPL34P49207 117 aaKnown RBP24.47■■□□□ 1.51
LSM4-204ENST00000594828 E2F5Q15329 346 aa24.47■■□□□ 1.51
LSM4-204ENST00000594828 TPD52L1Q16890 204 aaPredicted RBP24.47■■□□□ 1.51
LSM4-204ENST00000594828 PPM1JQ5JR12 505 aa24.47■■□□□ 1.51
LSM4-204ENST00000594828 DENND1BQ6P3S1 775 aa24.47■■□□□ 1.51
LSM4-204ENST00000594828 SLC36A4Q6YBV0 504 aa24.47■■□□□ 1.51
LSM4-204ENST00000594828 ARMCX6Q7L4S7 300 aa24.47■■□□□ 1.51
LSM4-204ENST00000594828 IRF2BP1Q8IU81 584 aa24.47■■□□□ 1.51
LSM4-204ENST00000594828 UNC45BQ8IWX7 931 aa24.47■■□□□ 1.51
LSM4-204ENST00000594828 ZNF606Q8WXB4 792 aa24.47■■□□□ 1.51
LSM4-204ENST00000594828 CLSTN2Q9H4D0 955 aa24.47■■□□□ 1.51
LSM4-204ENST00000594828 TIMM44O43615 452 aa24.46■■□□□ 1.51
LSM4-204ENST00000594828 NCAM1P13591 858 aa24.46■■□□□ 1.51
LSM4-204ENST00000594828 HOXD9P28356 352 aaPredicted RBP24.46■■□□□ 1.51
LSM4-204ENST00000594828 ACADSBP45954 432 aa24.46■■□□□ 1.51
LSM4-204ENST00000594828 MTIF2P46199 727 aaKnown RBP24.46■■□□□ 1.51
LSM4-204ENST00000594828 STARD3Q14849 445 aa24.46■■□□□ 1.51
LSM4-204ENST00000594828 EIF4HQ15056 248 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms