RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 NEDD8-MDP1E9PL57 170 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 LAMTOR5O43504 91 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 TRUB2O95900 331 aaKnown RBP15.65■□□□□ 0.1
UPF1-202ENST00000594243 IGLV3-27P01718 113 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 CYBBP04839 570 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 UNGP13051 313 aaPredicted RBP15.65■□□□□ 0.1
UPF1-202ENST00000594243 MMP8P22894 467 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 NOS2P35228 1153 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 NSFP46459 744 aaKnown RBP15.65■□□□□ 0.1
UPF1-202ENST00000594243 SLC11A2P49281 568 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 PPP2R5DQ14738 602 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 ASIC2Q16515 512 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 XYLT1Q86Y38 959 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 NAT16Q8N8M0 369 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 PRSS33Q8NF86 280 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 PIWIL1Q96J94 861 aaKnown RBP15.65■□□□□ 0.1
UPF1-202ENST00000594243 XPO4Q9C0E2 1151 aaKnown RBP15.65■□□□□ 0.1
UPF1-202ENST00000594243 TTYH3Q9C0H2 523 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 RBM12Q9NTZ6 932 aaKnown RBP15.65■□□□□ 0.1
UPF1-202ENST00000594243 SEPT11Q9NVA2 429 aaKnown RBP15.65■□□□□ 0.1
UPF1-202ENST00000594243 TMEM51Q9NW97 253 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.65■□□□□ 0.1
UPF1-202ENST00000594243 RRN3Q9NYV6 651 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 DEC1Q9P2X7 70 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 STOML2Q9UJZ1 356 aa15.65■□□□□ 0.1
UPF1-202ENST00000594243 A0A0A0MRY4 1105 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 ATG13O75143 517 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 DAB1O75553 588 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 GRAP2O75791 330 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 EGFP01133 1207 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 APODP05090 189 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 TYRP14679 529 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 TNFAIP3P21580 790 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 GRIA2P42262 883 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 MATKP42679 507 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 SLC6A11P48066 632 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 MTAPQ13126 283 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 ANGPT1Q15389 498 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 CLEC16AQ2KHT3 1053 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 MPPE1Q53F39 396 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 ADGRF1Q5T601 910 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 FAM102AQ5T9C2 384 aaPredicted RBP15.64■□□□□ 0.09
UPF1-202ENST00000594243 PPP1R2P3Q6NXS1 205 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 FAM217AQ8IXS0 508 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 SPEM1Q8N4L4 309 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 ADAM32Q8TC27 787 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 SLC39A13Q96H72 371 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 PCDHB18PQ96TA0 734 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 DDX50Q9BQ39 737 aaKnown RBP15.64■□□□□ 0.09
UPF1-202ENST00000594243 IRX2Q9BZI1 471 aaPredicted RBP15.64■□□□□ 0.09
UPF1-202ENST00000594243 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.64■□□□□ 0.09
UPF1-202ENST00000594243 SLC12A6Q9UHW9 1150 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 STAP1Q9ULZ2 295 aa15.64■□□□□ 0.09
UPF1-202ENST00000594243 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.64■□□□□ 0.09
UPF1-202ENST00000594243 H0Y858 1186 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 IRAK2O43187 625 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 ACSL4O60488 711 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 IGLV3-25P01717 112 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 APOEP02649 317 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 SLC2A3P11169 496 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 PRKCIP41743 596 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 TNFRSF4P43489 277 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 CCR3P51677 355 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 RNASE9P60153 205 aaKnown RBP15.63■□□□□ 0.09
UPF1-202ENST00000594243 CENPCQ03188 943 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 TCF15Q12870 199 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 MTA1Q13330 715 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 NAIF1Q69YI7 327 aaPredicted RBP15.63■□□□□ 0.09
UPF1-202ENST00000594243 MMS22LQ6ZRQ5 1243 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 ARCQ7LC44 396 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 TAC4Q86UU9 113 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 C12orf40Q86WS4 652 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 ETFBKMTQ8IXQ9 262 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 SLC30A5Q8TAD4 765 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 DDI1Q8WTU0 396 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 FCRL2Q96LA5 508 aaPredicted RBP15.63■□□□□ 0.09
UPF1-202ENST00000594243 HAUS4Q9H6D7 363 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 ARHGEF4Q9NR80 690 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 ADAM22Q9P0K1 906 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 FBXO4Q9UKT5 387 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 CAPN11Q9UMQ6 739 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 LUC7L2Q9Y383 392 aaKnown RBP15.63■□□□□ 0.09
UPF1-202ENST00000594243 BZW2Q9Y6E2 419 aaKnown RBP15.63■□□□□ 0.09
UPF1-202ENST00000594243 ITIH6Q6UXX5 1313 aa15.63■□□□□ 0.09
UPF1-202ENST00000594243 ZDBF2Q9HCK1 2354 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 CHURC1-FNTBB4DL54 471 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 GOLGA8SH3BPF8 625 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 CACNG3O60359 315 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 TULP3O75386 442 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 KAT7O95251 611 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 PENKP01210 267 aaPredicted RBP15.62■□□□□ 0.09
UPF1-202ENST00000594243 CALB1P05937 261 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 CCR1P32246 355 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 CXCL12P48061 93 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 ZBED6P86452 979 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 KLHL30Q0D2K2 578 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 EIF4EBP2Q13542 120 aaPredicted RBP15.62■□□□□ 0.09
UPF1-202ENST00000594243 C2CD6Q53TS8 623 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 FYB2Q5VWT5 728 aa15.62■□□□□ 0.09
UPF1-202ENST00000594243 ACAD10Q6JQN1 1059 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms