RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 INSRRP14616 1297 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 CYP2F1P24903 491 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 AQP5P55064 265 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 RBP5P82980 135 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 ACOT1Q86TX2 421 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 TRIM42Q8IWZ5 723 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 RBM15BQ8NDT2 890 aaKnown RBP17.06■□□□□ 0.32
LIG1-206ENST00000594067 NRDE2Q9H7Z3 1164 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 SIRPGQ9P1W8 387 aa17.06■□□□□ 0.32
LIG1-206ENST00000594067 POLE2P56282 527 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 HDAC4P56524 1084 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 SLC10A2Q12908 348 aaPredicted RBP17.05■□□□□ 0.32
LIG1-206ENST00000594067 TEX44Q53QW1 395 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 GJC2Q5T442 439 aaPredicted RBP17.05■□□□□ 0.32
LIG1-206ENST00000594067 SMC1BQ8NDV3 1235 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 LPIN3Q9BQK8 851 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 MRPL45Q9BRJ2 306 aaKnown RBP17.05■□□□□ 0.32
LIG1-206ENST00000594067 DPYSL4O14531 572 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 MAGEA6P43360 314 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 ERFP50548 548 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 SLC6A3Q01959 620 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 KDSRQ06136 332 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 CBLBQ13191 982 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 GSTA3Q16772 222 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 UNC5BQ8IZJ1 945 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 GSDMBQ8TAX9 411 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 MPHOSPH6Q99547 160 aaKnown RBP17.05■□□□□ 0.32
LIG1-206ENST00000594067 EBNA1BP2Q99848 306 aaKnown RBP17.05■□□□□ 0.32
LIG1-206ENST00000594067 TXNRD2Q9NNW7 524 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 PLA2G4CQ9UP65 541 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 WDR90Q96KV7 1748 aa17.05■□□□□ 0.32
LIG1-206ENST00000594067 PAPSS1O43252 624 aaPredicted RBP17.04■□□□□ 0.32
LIG1-206ENST00000594067 GABBR2O75899 941 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 Q3C1V9 767 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 CDKL3Q8IVW4 592 aaPredicted RBP17.04■□□□□ 0.32
LIG1-206ENST00000594067 MCUQ8NE86 351 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 SLC16A10Q8TF71 515 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 DEPDC1BQ8WUY9 529 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 KIF12Q96FN5 646 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 DDX50Q9BQ39 737 aaKnown RBP17.04■□□□□ 0.32
LIG1-206ENST00000594067 CXCL16Q9H2A7 254 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 DHX35Q9H5Z1 703 aaKnown RBP17.04■□□□□ 0.32
LIG1-206ENST00000594067 EVPLQ92817 2033 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 FAM159BA6NKW6 160 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 RTN3O95197 1032 aaPredicted RBP17.04■□□□□ 0.32
LIG1-206ENST00000594067 ANPEPP15144 967 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 SLC26A2P50443 739 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 ALDH18A1P54886 795 aaKnown RBP17.04■□□□□ 0.32
LIG1-206ENST00000594067 FAM187BQ17R55 369 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 CRLF3Q8IUI8 442 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 SCUBE1Q8IWY4 988 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 CLEC4CQ8WTT0 213 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 LRRC39Q96DD0 335 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 CLPTM1LQ96KA5 538 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 PANX3Q96QZ0 392 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 NR1H4Q96RI1 486 aaPredicted RBP17.04■□□□□ 0.32
LIG1-206ENST00000594067 ZNF670Q9BS34 389 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 NFKBIZQ9BYH8 718 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 WWP1Q9H0M0 922 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 PDP2Q9P2J9 529 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 SLC17A6Q9P2U8 582 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 ANGPTL2Q9UKU9 493 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 ITGA11Q9UKX5 1188 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 KIAA1257Q9ULG3 409 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 IRF6O14896 467 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 BPGMP07738 259 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 UBTFL6P0CB48 400 aaPredicted RBP17.04■□□□□ 0.32
LIG1-206ENST00000594067 MAGEA3P43357 314 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 C16orf46Q6P387 395 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 NET1Q7Z628 596 aaPredicted RBP17.04■□□□□ 0.32
LIG1-206ENST00000594067 STKLD1Q8NE28 680 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 MTBPQ96DY7 904 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 RILPQ96NA2 401 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 TBCBQ99426 244 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 SNX9Q9Y5X1 595 aa17.04■□□□□ 0.32
LIG1-206ENST00000594067 PPEF2O14830 753 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 MDM4O15151 490 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 TM7SF2O76062 418 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 LYNP07948 512 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 CRHR1P34998 444 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 KCNT2Q6UVM3 1135 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 RIPOR1Q6ZS17 1223 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 MYLK4Q86YV6 388 aaPredicted RBP17.03■□□□□ 0.32
LIG1-206ENST00000594067 ADGRF2Q8IZF7 708 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 EBF4Q9BQW3 602 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 SLC4A5Q9BY07 1137 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 TRIM4Q9C037 500 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 MKS1Q9NXB0 559 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 ERAP1Q9NZ08 941 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 GPRC5DQ9NZD1 345 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 HBS1LQ9Y450 684 aaKnown RBP17.03■□□□□ 0.32
LIG1-206ENST00000594067 MFHAS1Q9Y4C4 1052 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 NME7Q9Y5B8 376 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 PCDHA11Q9Y5I1 949 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 ADORA2AP29274 412 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 L1CAMP32004 1257 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 ACTR3P61158 418 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 STX3Q13277 289 aa17.03■□□□□ 0.32
LIG1-206ENST00000594067 SMAD1Q15797 465 aaKnown RBP17.03■□□□□ 0.32
LIG1-206ENST00000594067 PKDCCQ504Y2 493 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms