RNA–Protein interactions for RNA: ENST00000593699.5

LRMDA-209, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 1 (best)

Gene LRMDA, Length 1,124 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-209ENST00000593699 ZNF217O75362 1048 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 CAVIN2O95810 425 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 LTFP02788 710 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 PRKCSHP14314 528 aaPredicted RBP11.44□□□□□ -0.58
LRMDA-209ENST00000593699 GNA15P30679 374 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 P2RY2P41231 377 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 SLC11A2P49281 568 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 DHPSP49366 369 aaPredicted RBP11.44□□□□□ -0.58
LRMDA-209ENST00000593699 LIMK1P53667 647 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 SF3A2Q15428 464 aaKnown RBP11.44□□□□□ -0.58
LRMDA-209ENST00000593699 TRIP4Q15650 581 aaPredicted RBP11.44□□□□□ -0.58
LRMDA-209ENST00000593699 PKDCCQ504Y2 493 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 MPPE1Q53F39 396 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 SPDYCQ5MJ68 293 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 EMC10Q5UCC4 262 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 SMYD5Q6GMV2 418 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 MSANTD2Q6P1R3 559 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 RBM43Q6ZSC3 357 aaKnown RBP11.44□□□□□ -0.58
LRMDA-209ENST00000593699 BHLHA9Q7RTU4 235 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 UNC45BQ8IWX7 931 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 OLIG1Q8TAK6 271 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 LMO3Q8TAP4 145 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 TFAP2BQ92481 460 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 KAT5Q92993 513 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 SERPINB11Q96P15 392 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 DDX50Q9BQ39 737 aaKnown RBP11.44□□□□□ -0.58
LRMDA-209ENST00000593699 EDEM2Q9BV94 578 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 UBE2TQ9NPD8 197 aaPredicted RBP11.44□□□□□ -0.58
LRMDA-209ENST00000593699 ZDHHC4Q9NPG8 344 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 ST7Q9NRC1 585 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 PLK2Q9NYY3 685 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 TMEM63CQ9P1W3 806 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 APEX2Q9UBZ4 518 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 ATG2BQ96BY7 2078 aa11.44□□□□□ -0.58
LRMDA-209ENST00000593699 RALGAPA1Q6GYQ0 2036 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 PLXND1Q9Y4D7 1925 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 TRIM24O15164 1050 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 THAP12O43422 761 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 KLKB1P03952 638 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
LRMDA-209ENST00000593699 HNRNPLP14866 589 aaKnown RBP eCLIP11.43□□□□□ -0.584e-7■■■■□ 22.9
LRMDA-209ENST00000593699 KCNA4P22459 653 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 WASP42768 502 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 ATXN1P54253 815 aaKnown RBP11.43□□□□□ -0.58
LRMDA-209ENST00000593699 RING1Q06587 406 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 CCDC6Q16204 474 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 EXOC3L4Q17RC7 722 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 KLHL40Q2TBA0 621 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 PLA2G2CQ5R387 149 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 FYB2Q5VWT5 728 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 CAVIN1Q6NZI2 390 aaKnown RBP11.43□□□□□ -0.58
LRMDA-209ENST00000593699 TRIM65Q6PJ69 517 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 TOGARAM2Q6ZUX3 1019 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 RABEPKQ7Z6M1 372 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 CCDC117Q8IWD4 279 aaPredicted RBP11.43□□□□□ -0.58
LRMDA-209ENST00000593699 FAM217AQ8IXS0 508 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 WFIKKN2Q8TEU8 576 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 IPO4Q8TEX9 1081 aaKnown RBP11.43□□□□□ -0.58
LRMDA-209ENST00000593699 SLC35F5Q8WV83 523 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 FAM149B1Q96BN6 582 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 KREMEN1Q96MU8 473 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 NOX5Q96PH1 765 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 GABRG3Q99928 467 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 IRX2Q9BZI1 471 aaPredicted RBP11.43□□□□□ -0.58
LRMDA-209ENST00000593699 MIS12Q9H081 205 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 THAP9Q9H5L6 903 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 CALCOCO1Q9P1Z2 691 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 INVSQ9Y283 1065 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 CEP83Q9Y592 693 aa11.43□□□□□ -0.58
LRMDA-209ENST00000593699 PRRT4C9JH25 899 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 PIK3R2O00459 728 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 CAPN9O14815 690 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 KHNYNO15037 678 aaKnown RBP11.42□□□□□ -0.58
LRMDA-209ENST00000593699 IRAK2O43187 625 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 MSI1O43347 362 aaKnown RBP11.42□□□□□ -0.58
LRMDA-209ENST00000593699 SYNCRIPO60506 623 aaKnown RBP11.42□□□□□ -0.58
LRMDA-209ENST00000593699 LETM1O95202 739 aaPredicted RBP11.42□□□□□ -0.58
LRMDA-209ENST00000593699 APOEP02649 317 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 NCAM1P13591 858 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 GABRG2P18507 467 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 BCKDHBP21953 392 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 HOXD12P35452 270 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 USP8P40818 1118 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 TBX4P57082 545 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 SNX16P57768 344 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 RPL6Q02878 288 aaKnown RBP11.42□□□□□ -0.58
LRMDA-209ENST00000593699 NNTQ13423 1086 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 NFKBIBQ15653 356 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 MAN2A1Q16706 1144 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 ADGRF1Q5T601 910 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 LYSMD4Q5XG99 296 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 RNF43Q68DV7 783 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 PMF1Q6P1K2 205 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 KIAA1324Q6UXG2 1013 aaKnown RBP11.42□□□□□ -0.58
LRMDA-209ENST00000593699 STK32AQ8WU08 396 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 NDRG1Q92597 394 aaKnown RBP11.42□□□□□ -0.58
LRMDA-209ENST00000593699 CRACR2AQ9BSW2 395 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 CIPCQ9C0C6 399 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 CACNA2D2Q9NY47 1150 aa11.42□□□□□ -0.58
LRMDA-209ENST00000593699 SFMBT1Q9UHJ3 866 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms