RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 FUT11Q495W5 492 aa23.75■■□□□ 1.39
SSBP4-203ENST00000593641 ANKS1BQ7Z6G8 1248 aa23.75■■□□□ 1.39
SSBP4-203ENST00000593641 PIGZQ86VD9 579 aa23.75■■□□□ 1.39
SSBP4-203ENST00000593641 SLC4A11Q8NBS3 891 aa23.75■■□□□ 1.39
SSBP4-203ENST00000593641 SEMA4DQ92854 862 aa23.75■■□□□ 1.39
SSBP4-203ENST00000593641 TMEM121BQ9BXQ6 578 aaPredicted RBP23.75■■□□□ 1.39
SSBP4-203ENST00000593641 UBXN6Q9BZV1 441 aa23.75■■□□□ 1.39
SSBP4-203ENST00000593641 PRDM16Q9HAZ2 1276 aa23.75■■□□□ 1.39
SSBP4-203ENST00000593641 RAB20Q9NX57 234 aa23.75■■□□□ 1.39
SSBP4-203ENST00000593641 THAP10Q9P2Z0 257 aaPredicted RBP23.75■■□□□ 1.39
SSBP4-203ENST00000593641 WDFY3Q8IZQ1 3526 aa23.75■■□□□ 1.39
SSBP4-203ENST00000593641 HYAL3O43820 417 aaPredicted RBP23.74■■□□□ 1.39
SSBP4-203ENST00000593641 SYNCRIPO60506 623 aaKnown RBP23.74■■□□□ 1.39
SSBP4-203ENST00000593641 YWHAGP61981 247 aaKnown RBP eCLIP23.74■■□□□ 1.39
SSBP4-203ENST00000593641 HNRNPDQ14103 355 aaKnown RBP23.74■■□□□ 1.39
SSBP4-203ENST00000593641 ZCWPW2Q504Y3 356 aa23.74■■□□□ 1.39
SSBP4-203ENST00000593641 ARHGAP17Q68EM7 881 aa23.74■■□□□ 1.39
SSBP4-203ENST00000593641 DENND1CQ8IV53 801 aa23.74■■□□□ 1.39
SSBP4-203ENST00000593641 GATA6Q92908 595 aa23.74■■□□□ 1.39
SSBP4-203ENST00000593641 EEF2KMTQ96G04 330 aa23.74■■□□□ 1.39
SSBP4-203ENST00000593641 P2RY11Q96G91 374 aa23.74■■□□□ 1.39
SSBP4-203ENST00000593641 SCAND2PQ9GZW5 306 aaPredicted RBP23.74■■□□□ 1.39
SSBP4-203ENST00000593641 DNAAF2Q9NVR5 837 aaKnown RBP23.74■■□□□ 1.39
SSBP4-203ENST00000593641 AGO1Q9UL18 857 aaKnown RBP23.74■■□□□ 1.39
SSBP4-203ENST00000593641 NEUROG3Q9Y4Z2 214 aa23.74■■□□□ 1.39
SSBP4-203ENST00000593641 ATP6V1DQ9Y5K8 247 aa23.74■■□□□ 1.39
SSBP4-203ENST00000593641 AKAP13Q12802 2813 aa23.74■■□□□ 1.39
SSBP4-203ENST00000593641 A0A1W2PQ27 194 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 A0A1W2PQ64 194 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 SLC12A8A0AV02 714 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 MEI4A8MW99 385 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 H0Y626 953 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 CETN3O15182 167 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 TRIM16O95361 564 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 IL12RB1P42701 662 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 RAD23BP54727 409 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 EIF4HQ15056 248 aaKnown RBP23.73■■□□□ 1.39
SSBP4-203ENST00000593641 RAB41Q5JT25 222 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 METTL3Q86U44 580 aaKnown RBP23.73■■□□□ 1.39
SSBP4-203ENST00000593641 CPXM2Q8N436 756 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 ANKRD52Q8NB46 1076 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 OR2I1PQ8NGU4 316 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 DDI1Q8WTU0 396 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 TOE1Q96GM8 510 aaKnown RBP23.73■■□□□ 1.39
SSBP4-203ENST00000593641 ARID3AQ99856 593 aa23.73■■□□□ 1.39
SSBP4-203ENST00000593641 TKTL1P51854 596 aa23.72■■□□□ 1.39
SSBP4-203ENST00000593641 ARID5AQ03989 594 aa23.72■■□□□ 1.39
SSBP4-203ENST00000593641 PLD4Q96BZ4 506 aa23.72■■□□□ 1.39
SSBP4-203ENST00000593641 CIPCQ9C0C6 399 aa23.72■■□□□ 1.39
SSBP4-203ENST00000593641 MKRN2Q9H000 416 aaKnown RBP23.72■■□□□ 1.39
SSBP4-203ENST00000593641 USP36Q9P275 1121 aaKnown RBP23.72■■□□□ 1.39
SSBP4-203ENST00000593641 KNL1Q8NG31 2342 aa23.72■■□□□ 1.39
SSBP4-203ENST00000593641 ZZEF1O43149 2961 aa23.72■■□□□ 1.39
SSBP4-203ENST00000593641 ZNF202O95125 648 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 ZBED1O96006 694 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 NCAM1P13591 858 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 MAOBP27338 520 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 SLC14A1Q13336 389 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 ENPP2Q13822 863 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 DCAF17Q5H9S7 520 aaPredicted RBP23.71■■□□□ 1.39
SSBP4-203ENST00000593641 TCERG1LQ5VWI1 586 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 TMPRSS6Q8IU80 811 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 SMYD4Q8IYR2 804 aaPredicted RBP23.71■■□□□ 1.39
SSBP4-203ENST00000593641 PRCCQ92733 491 aaPredicted RBP23.71■■□□□ 1.39
SSBP4-203ENST00000593641 SIPA1Q96FS4 1042 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 PIWIL1Q96J94 861 aaKnown RBP23.71■■□□□ 1.39
SSBP4-203ENST00000593641 SLC2A11Q9BYW1 496 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 OLA1Q9NTK5 396 aaKnown RBP23.71■■□□□ 1.39
SSBP4-203ENST00000593641 ELOVL2Q9NXB9 296 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 WSB2Q9NYS7 404 aaPredicted RBP23.71■■□□□ 1.39
SSBP4-203ENST00000593641 ZDHHC9Q9Y397 364 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 MSRB2Q9Y3D2 182 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 NFE2L3Q9Y4A8 694 aa23.71■■□□□ 1.39
SSBP4-203ENST00000593641 ACADMP11310 421 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 CD59P13987 128 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 OXTRP30559 389 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 BCAT1P54687 386 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 MCCD1P59942 119 aaPredicted RBP23.7■■□□□ 1.38
SSBP4-203ENST00000593641 ZNF234Q14588 700 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 GOLGA7BQ2TAP0 167 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 ZCCHC14Q8WYQ9 949 aaKnown RBP23.7■■□□□ 1.38
SSBP4-203ENST00000593641 TATDN2Q93075 761 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 GPR174Q9BXC1 333 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 ULBP1Q9BZM6 244 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 ZDHHC5Q9C0B5 715 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 GOLPH3LQ9H4A5 285 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 LRRC4Q9HBW1 653 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 ITM2CQ9NQX7 267 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 HESX1Q9UBX0 185 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 TSPAN16Q9UKR8 245 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 PCDHB9Q9Y5E1 797 aa23.7■■□□□ 1.38
SSBP4-203ENST00000593641 NUMA1Q14980 2115 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 PKD1L2Q7Z442 2459 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 A0A1B0GTW7 788 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 XPO1O14980 1071 aaKnown RBP23.69■■□□□ 1.38
SSBP4-203ENST00000593641 HARS2P49590 506 aaKnown RBP23.69■■□□□ 1.38
SSBP4-203ENST00000593641 YWHAEP62258 255 aaKnown RBP23.69■■□□□ 1.38
SSBP4-203ENST00000593641 GRIK2Q13002 908 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 ZNF423Q2M1K9 1284 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 SGO2Q562F6 1265 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms