RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 RHOP08100 348 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 SETSIPP0DME0 302 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 CEBPBP17676 345 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 MTHFRP42898 656 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 KCNQ1P51787 676 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 ZNF75DP51815 510 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 SLC5A3P53794 718 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 JAM2P57087 298 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 CYP4F8P98187 520 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 ITIH3Q06033 890 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 GOLGA8FQ08AF8 430 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 GOLGA8DPQ0D2H9 430 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 ADIGQ0VDE8 80 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 BST2Q10589 180 aaKnown RBP6.74□□□□□ -1.33
VPS4B-205ENST00000591383 TRIM14Q14142 442 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 CBX2Q14781 532 aaPredicted RBP6.74□□□□□ -1.33
VPS4B-205ENST00000591383 NR1I3Q14994 352 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 STILQ15468 1287 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 LEXMQ3ZCV2 418 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 ARHGAP17Q68EM7 881 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 SPECC1LQ69YQ0 1117 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 DPY19L2P1Q6NXN4 242 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 DENND1BQ6P3S1 775 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 TMEM184AQ6ZMB5 413 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 CLEC20AQ6ZU45 233 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 GPRIN1Q7Z2K8 1008 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 GPR149Q86SP6 731 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 TTC30AQ86WT1 665 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 VSTM4Q8IW00 320 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 DRC7Q8IY82 874 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 FAM71AQ8IYT1 594 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 SIX6OS1Q8N1H7 587 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 CRYBG2Q8N1P7 616 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 C1orf131Q8NDD1 294 aaKnown RBP6.74□□□□□ -1.33
VPS4B-205ENST00000591383 CMASQ8NFW8 434 aaPredicted RBP6.74□□□□□ -1.33
VPS4B-205ENST00000591383 UBA3Q8TBC4 463 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 SLC20A1Q8WUM9 679 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 SECISBP2LQ93073 1101 aaKnown RBP6.74□□□□□ -1.33
VPS4B-205ENST00000591383 FBXO32Q969P5 355 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 PSMG2Q969U7 264 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 GAL3ST3Q96A11 431 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 ZNF512Q96ME7 567 aaPredicted RBP6.74□□□□□ -1.33
VPS4B-205ENST00000591383 HNRNPABQ99729 332 aaKnown RBP6.74□□□□□ -1.33
VPS4B-205ENST00000591383 SMOQ99835 787 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 ZSWIM1Q9BR11 485 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 NAA15Q9BXJ9 866 aaKnown RBP6.74□□□□□ -1.33
VPS4B-205ENST00000591383 ADAM7Q9H2U9 754 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 POMKQ9H5K3 350 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 SYNCQ9H7C4 482 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 TRPC7Q9HCX4 862 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 MAFFQ9ULX9 164 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 FAM50BQ9Y247 325 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 MRPS23Q9Y3D9 190 aaKnown RBP6.74□□□□□ -1.33
VPS4B-205ENST00000591383 DENND4CQ5VZ89 1909 aa6.74□□□□□ -1.33
VPS4B-205ENST00000591383 DOCK8Q8NF50 2099 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 TCF20Q9UGU0 1960 aaKnown RBP6.73□□□□□ -1.33
VPS4B-205ENST00000591383 NOTCH4Q99466 2003 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 GOLGA6L3A6NEY3 463 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 TULP2O00295 520 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 AP5Z1O43299 807 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 MBTPS2O43462 519 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 MFAP3LO75121 409 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 BEST1O76090 585 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 BPNT1O95861 308 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 C1RP00736 705 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 POU2F2P09086 479 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 CSH1P0DML2 217 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 CSH2P0DML3 217 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 IMPDH2P12268 514 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 LCP1P13796 627 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 IL9P15248 144 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 CYP11B1P15538 503 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 FERP16591 822 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 GJA1P17302 382 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 GABRR2P28476 465 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 KRT9P35527 623 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 PBX1P40424 430 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 BPIFB4P59827 614 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 ZNF252P-AS1Q0IIN9 211 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 PDCLQ13371 301 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 AAK1Q2M2I8 961 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 SLC5A9Q2M3M2 681 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 UVSSAQ2YD98 709 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 ATAT1Q5SQI0 421 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 CYP4A22Q5TCH4 519 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 SFMBT2Q5VUG0 894 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 E4F1Q66K89 784 aaPredicted RBP6.73□□□□□ -1.33
VPS4B-205ENST00000591383 LCLAT1Q6UWP7 414 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 DENND5BQ6ZUT9 1274 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 PAQR9Q6ZVX9 377 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 LSRQ86X29 649 aaPredicted RBP6.73□□□□□ -1.33
VPS4B-205ENST00000591383 TMC8Q8IU68 726 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 TDRD5Q8NAT2 981 aaKnown RBP6.73□□□□□ -1.33
VPS4B-205ENST00000591383 ANKRD52Q8NB46 1076 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 ZMIZ2Q8NF64 920 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 ZNF397Q8NF99 534 aaPredicted RBP6.73□□□□□ -1.33
VPS4B-205ENST00000591383 IPO4Q8TEX9 1081 aaKnown RBP6.73□□□□□ -1.33
VPS4B-205ENST00000591383 IQCDQ96DY2 449 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 TCEAL4Q96EI5 215 aa6.73□□□□□ -1.33
VPS4B-205ENST00000591383 C8orf48Q96LL4 319 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms