RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 NUDT5Q9UKK9 219 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 SNX11Q9Y5W9 270 aa18.24■□□□□ 0.51
RETREG3-210ENST00000590541 NPC1O15118 1278 aa18.23■□□□□ 0.51
RETREG3-210ENST00000590541 CLIC2O15247 247 aa18.23■□□□□ 0.51
RETREG3-210ENST00000590541 PENKP01210 267 aaPredicted RBP18.23■□□□□ 0.51
RETREG3-210ENST00000590541 MAP3K7CLP57077 242 aa18.23■□□□□ 0.51
RETREG3-210ENST00000590541 BMT2Q1RMZ1 405 aa18.23■□□□□ 0.51
RETREG3-210ENST00000590541 FYB2Q5VWT5 728 aa18.23■□□□□ 0.51
RETREG3-210ENST00000590541 GPRIN1Q7Z2K8 1008 aa18.23■□□□□ 0.51
RETREG3-210ENST00000590541 CACUL1Q86Y37 369 aa18.23■□□□□ 0.51
RETREG3-210ENST00000590541 GOLGA5Q8TBA6 731 aa18.23■□□□□ 0.51
RETREG3-210ENST00000590541 PIP4K2CQ8TBX8 421 aa18.23■□□□□ 0.51
RETREG3-210ENST00000590541 SLC39A7Q92504 469 aa18.23■□□□□ 0.51
RETREG3-210ENST00000590541 GOLGA4Q13439 2230 aaKnown RBP18.22■□□□□ 0.51
RETREG3-210ENST00000590541 TK2O00142 265 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 CYP26A1O43174 497 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 SYNCRIPO60506 623 aaKnown RBP18.22■□□□□ 0.51
RETREG3-210ENST00000590541 STC2O76061 302 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 PRKCHP24723 683 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 ITPKBP27987 946 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 AFMP43652 599 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 PLA2G4AP47712 749 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 CYP2J2P51589 502 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 AFF3P51826 1226 aaKnown RBP18.22■□□□□ 0.51
RETREG3-210ENST00000590541 ORC1Q13415 861 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 BECN1Q14457 450 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 ZNF234Q14588 700 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 KLHDC10Q6PID8 442 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 DHRS13Q6UX07 377 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 SCARA5Q6ZMJ2 495 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 FAM124AQ86V42 546 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 C12orf56Q8IXR9 622 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 XXYLT1Q8NBI6 393 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 RBBP8NLQ8NC74 664 aaPredicted RBP18.22■□□□□ 0.51
RETREG3-210ENST00000590541 SLC2A14Q8TDB8 520 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 PIWIL1Q96J94 861 aaKnown RBP18.22■□□□□ 0.51
RETREG3-210ENST00000590541 PCED1AQ9H1Q7 454 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 BLZF1Q9H2G9 400 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 C6orf106Q9H6K1 298 aaPredicted RBP18.22■□□□□ 0.51
RETREG3-210ENST00000590541 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.22■□□□□ 0.51
RETREG3-210ENST00000590541 SERTAD1Q9UHV2 236 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 SCML2Q9UQR0 700 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 ZDHHC9Q9Y397 364 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 TMEM131Q92545 1883 aa18.22■□□□□ 0.51
RETREG3-210ENST00000590541 SHROOM3Q8TF72 1996 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 A0A1W2PQH9 124 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 HHLA1C9JL84 531 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 E9PAM4 449 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 KCNK3O14649 394 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 ACTN4O43707 911 aaKnown RBP18.21■□□□□ 0.51
RETREG3-210ENST00000590541 KLKB1P03952 638 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 ACADMP11310 421 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 RARGP13631 454 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 CASP4P49662 377 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 CUL4BQ13620 913 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 KNOP1Q1ED39 458 aaKnown RBP18.21■□□□□ 0.51
RETREG3-210ENST00000590541 CCDC157Q569K6 752 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 ZNF667Q5HYK9 610 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 PLEKHO2Q8TD55 490 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 UCMAQ8WVF2 138 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 SNX19Q92543 992 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 PAGE5Q96GU1 130 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 PRORYQ9H606 182 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 HMGXB4Q9UGU5 601 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 DNMT3LQ9UJW3 386 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 CLEC4EQ9ULY5 219 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 HPSEQ9Y251 543 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 ANKRD6Q9Y2G4 727 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 CKAP5Q14008 2032 aa18.21■□□□□ 0.51
RETREG3-210ENST00000590541 PLK4O00444 970 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 ATXN7O15265 892 aaPredicted RBP18.2■□□□□ 0.5
RETREG3-210ENST00000590541 PCDHGA12O60330 932 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 PHACTR2O75167 634 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 HLA-EP13747 358 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 PFKFB1P16118 471 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 ACSL1P33121 698 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 GRK6P43250 576 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 ZNF699Q32M78 642 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 LAYNQ6UX15 382 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 CRYBG2Q8N1P7 616 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 C12orf29Q8N999 325 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 TMEM174Q8WUU8 243 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 TM9SF3Q9HD45 589 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 SLC39A2Q9NP94 309 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 OSGEPQ9NPF4 335 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 FAM49BQ9NUQ9 324 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 EXOC1Q9NV70 894 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 ELOVL2Q9NXB9 296 aa18.2■□□□□ 0.5
RETREG3-210ENST00000590541 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.2■□□□□ 0.5
RETREG3-210ENST00000590541 FAM237AA0A1B0GTK4 181 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 A0A1B0GVL5 298 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 A0A1W2PQ27 194 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 A0A1W2PQ64 194 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 H0Y8X5 98 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 EPHX1P07099 455 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 SYKP43405 635 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 GRIA4P48058 902 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 CCT8P50990 548 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 NDST1P52848 882 aa18.19■□□□□ 0.5
RETREG3-210ENST00000590541 KCNT1Q5JUK3 1230 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms