RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 FAM71AQ8IYT1 594 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 PHTF2Q8N3S3 785 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 WDTC1Q8N5D0 677 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 ZNF513Q8N8E2 541 aaPredicted RBP12.6□□□□□ -0.39
TPM4-212ENST00000590180 TERB1Q8NA31 727 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 IL17RCQ8NAC3 791 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 TMA16Q96EY4 203 aaKnown RBP12.6□□□□□ -0.39
TPM4-212ENST00000590180 PPP1R13BQ96KQ4 1090 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 NOX5Q96PH1 765 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 STK33Q9BYT3 514 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 NAT10Q9H0A0 1025 aaKnown RBP12.6□□□□□ -0.39
TPM4-212ENST00000590180 SYNCQ9H7C4 482 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 GMEB2Q9UKD1 530 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 PCDHGC3Q9UN70 934 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 CEP83Q9Y592 693 aa12.6□□□□□ -0.39
TPM4-212ENST00000590180 SGK1O00141 431 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 RPP40O75818 363 aaKnown RBP12.59□□□□□ -0.39
TPM4-212ENST00000590180 ALDH1A2O94788 518 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 FYNP06241 537 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 UCHL3P15374 230 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 SLC11A2P49281 568 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 COPB1P53618 953 aaKnown RBP12.59□□□□□ -0.39
TPM4-212ENST00000590180 SNX16P57768 344 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 YWHAZP63104 245 aaKnown RBP12.59□□□□□ -0.39
TPM4-212ENST00000590180 PDCLQ13371 301 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 HSF5Q4G112 596 aaPredicted RBP12.59□□□□□ -0.39
TPM4-212ENST00000590180 MPPE1Q53F39 396 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 ADGRF1Q5T601 910 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 TAF3Q5VWG9 929 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 SYPL2Q5VXT5 272 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 NUGGCQ68CJ6 796 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 SMYD5Q6GMV2 418 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 ANO7Q6IWH7 933 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 CACNA2D4Q7Z3S7 1137 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 TRMT11Q7Z4G4 463 aaKnown RBP12.59□□□□□ -0.39
TPM4-212ENST00000590180 KIAA2013Q8IYS2 634 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 PGBD3Q8N328 593 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 CPXM2Q8N436 756 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 ADAM32Q8TC27 787 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 KCNV2Q8TDN2 545 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 GAB3Q8WWW8 586 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 TRIM62Q9BVG3 475 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 LHX5Q9H2C1 402 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 POLMQ9NP87 494 aaPredicted RBP12.59□□□□□ -0.39
TPM4-212ENST00000590180 PLCB1Q9NQ66 1216 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 TJP2Q9UDY2 1190 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 EBF1Q9UH73 591 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 INVSQ9Y283 1065 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 FANCMQ8IYD8 2048 aa12.59□□□□□ -0.39
TPM4-212ENST00000590180 GOLGA6L7A0A1B0GV03 622 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 PRRT4C9JH25 899 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 ZBTB24O43167 697 aaPredicted RBP12.58□□□□□ -0.4
TPM4-212ENST00000590180 PENKP01210 267 aaPredicted RBP12.58□□□□□ -0.4
TPM4-212ENST00000590180 NTSR1P30989 418 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 KLK7P49862 253 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 POLR2FP61218 127 aaKnown RBP12.58□□□□□ -0.4
TPM4-212ENST00000590180 TAF5Q15542 800 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 ANO6Q4KMQ2 910 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 USP39Q53GS9 565 aaKnown RBP12.58□□□□□ -0.4
TPM4-212ENST00000590180 EFHC1Q5JVL4 640 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 FYB2Q5VWT5 728 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 LAIR1Q6GTX8 287 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 TMEM92Q6UXU6 159 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.58□□□□□ -0.4
TPM4-212ENST00000590180 CHPFQ8IZ52 775 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 AOPEPQ8N6M6 819 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 TMEM35BQ8NCS4 154 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 C1orf131Q8NDD1 294 aaKnown RBP12.58□□□□□ -0.4
TPM4-212ENST00000590180 DQX1Q8TE96 717 aaKnown RBP12.58□□□□□ -0.4
TPM4-212ENST00000590180 P2RY11Q96G91 374 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 SERPINB11Q96P15 392 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 CPXM1Q96SM3 734 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 NAA15Q9BXJ9 866 aaKnown RBP12.58□□□□□ -0.4
TPM4-212ENST00000590180 TPSD1Q9BZJ3 242 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 POPDC2Q9HBU9 364 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 NLRC4Q9NPP4 1024 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 FAM207AQ9NSI2 230 aaPredicted RBP12.58□□□□□ -0.4
TPM4-212ENST00000590180 BCCIPQ9P287 314 aaKnown RBP eCLIP12.58□□□□□ -0.4
TPM4-212ENST00000590180 LIMA1Q9UHB6 759 aaKnown RBP12.58□□□□□ -0.4
TPM4-212ENST00000590180 FBXO10Q9UK96 956 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 CLEC4EQ9ULY5 219 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 STARD13Q9Y3M8 1113 aa12.58□□□□□ -0.4
TPM4-212ENST00000590180 FAM170AA1A519 330 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 DCLK1O15075 740 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 ACSL4O60488 711 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 ADAM23O75077 832 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 GRAP2O75791 330 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 GFPT2O94808 682 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 LATS1O95835 1130 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 MOCS2O96007 188 aaPredicted RBP12.57□□□□□ -0.4
TPM4-212ENST00000590180 RETP07949 1114 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 HNRNPLP14866 589 aaKnown RBP eCLIP12.57□□□□□ -0.4
TPM4-212ENST00000590180 CYP11B1P15538 503 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 GBP1P32455 592 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 CDK17Q00537 523 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 UBXN1Q04323 297 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 SYCP1Q15431 976 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 DCAF6Q58WW2 860 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 EGFLAMQ63HQ2 1017 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 RFWD3Q6PCD5 774 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms