RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 CEP76Q8TAP6 659 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 CNGB3Q9NQW8 809 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 TMEM74BQ9NUR3 256 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 THAP10Q9P2Z0 257 aaPredicted RBP12.79□□□□□ -0.36
VAT1-206ENST00000589709 STOML2Q9UJZ1 356 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 MAN1B1Q9UKM7 699 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 HBS1LQ9Y450 684 aaKnown RBP12.79□□□□□ -0.36
VAT1-206ENST00000589709 PLXND1Q9Y4D7 1925 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 IGHV1OR15-9A0A0B4J2B8 117 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 TIMM44O43615 452 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 CYBBP04839 570 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 HMBSP08397 361 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 CD44P16070 742 aaKnown RBP12.78□□□□□ -0.36
VAT1-206ENST00000589709 NDUFV2P19404 249 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 ZNF445P59923 1031 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 RPL6Q02878 288 aaKnown RBP12.78□□□□□ -0.36
VAT1-206ENST00000589709 ADIGQ0VDE8 80 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 CETN1Q12798 172 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 LRMPQ12912 555 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 EIF4HQ15056 248 aaKnown RBP12.78□□□□□ -0.36
VAT1-206ENST00000589709 STILQ15468 1287 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 CNGA2Q16280 664 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 BSPRYQ5W0U4 402 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 TTI2Q6NXR4 508 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 RABEPKQ7Z6M1 372 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 SIX6OS1Q8N1H7 587 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 LMO3Q8TAP4 145 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 UBA3Q8TBC4 463 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 RNF139Q8WU17 664 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 SLC35F5Q8WV83 523 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 UCMAQ8WVF2 138 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 NDRG1Q92597 394 aaKnown RBP12.78□□□□□ -0.36
VAT1-206ENST00000589709 BHMTQ93088 406 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 PIWIL1Q96J94 861 aaKnown RBP12.78□□□□□ -0.36
VAT1-206ENST00000589709 MRGPRX1Q96LB2 322 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 NT5C1BQ96P26 610 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 NUSAP1Q9BXS6 441 aaKnown RBP12.78□□□□□ -0.36
VAT1-206ENST00000589709 ABCC13Q9NSE7 274 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 CACNA2D2Q9NY47 1150 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 ANGPTL2Q9UKU9 493 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 STON1Q9Y6Q2 735 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 CHD8Q9HCK8 2581 aa12.78□□□□□ -0.36
VAT1-206ENST00000589709 BICDL2A1A5D9 508 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 YJEFN3A6XGL0 299 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 WASH3PC4AMC7 463 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 E7ENQ6 273 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 LATS1O95835 1130 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 CEACAM1P13688 526 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 BMP6P22004 513 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 KCNA4P22459 653 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 ITPKAP23677 461 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 HARS2P49590 506 aaKnown RBP12.77□□□□□ -0.37
VAT1-206ENST00000589709 NOVA1P51513 510 aaKnown RBP12.77□□□□□ -0.37
VAT1-206ENST00000589709 ZNF33AQ06730 810 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 MORC3Q14149 939 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 STARD3Q14849 445 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 GEN1Q17RS7 908 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 DUOXA1Q1HG43 343 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 CCDC40Q4G0X9 1142 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 MPPE1Q53F39 396 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 TMEM270Q6UE05 265 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 ARMCX6Q7L4S7 300 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 ANKS1BQ7Z6G8 1248 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 FMNL3Q8IVF7 1028 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 RBBP8NLQ8NC74 664 aaPredicted RBP12.77□□□□□ -0.37
VAT1-206ENST00000589709 IRGQQ8WZA9 623 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 TFAP2BQ92481 460 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 ZNF419Q96HQ0 510 aaPredicted RBP12.77□□□□□ -0.37
VAT1-206ENST00000589709 IRX2Q9BZI1 471 aaPredicted RBP12.77□□□□□ -0.37
VAT1-206ENST00000589709 ELOVL2Q9NXB9 296 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 SLC6A14Q9UN76 642 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 RAD54BQ9Y620 910 aa12.77□□□□□ -0.37
VAT1-206ENST00000589709 CACNA1BQ00975 2339 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 RNF225M0QZC1 329 aaPredicted RBP12.76□□□□□ -0.37
VAT1-206ENST00000589709 GABBR2O75899 941 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 GNA14O95837 355 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 SERPINF2P08697 491 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 MARSP56192 900 aaKnown RBP12.76□□□□□ -0.37
VAT1-206ENST00000589709 DAOAP59103 153 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 GCNT1Q02742 428 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 ADGRF1Q5T601 910 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 ISM2Q6H9L7 571 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 PSAPL1Q6NUJ1 521 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 MSANTD2Q6P1R3 559 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 TRIM59Q8IWR1 403 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 PPM1KQ8N3J5 372 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 EHBP1Q8NDI1 1231 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 DDI1Q8WTU0 396 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 NELFBQ8WX92 580 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 HSFY1Q96LI6 401 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 ZSWIM1Q9BR11 485 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 CAPN10Q9HC96 672 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 ITM2CQ9NQX7 267 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 CLEC4EQ9ULY5 219 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 CYP8B1Q9UNU6 501 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.76□□□□□ -0.37
VAT1-206ENST00000589709 PCDHB4Q9Y5E5 795 aa12.76□□□□□ -0.37
VAT1-206ENST00000589709 UPK3BL1B0FP48 263 aa12.75□□□□□ -0.37
VAT1-206ENST00000589709 UPK3BL2E5RIL1 263 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms