RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 FAM71DQ8N9W8 422 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 APBB2Q92870 758 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 SCLYQ96I15 445 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 PWWP2AQ96N64 755 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 FOXP3Q9BZS1 431 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 ADAM7Q9H2U9 754 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 CDC42EP4Q9H3Q1 356 aaKnown RBP9.1□□□□□ -0.95
SMAD4-206ENST00000588860 NRDE2Q9H7Z3 1164 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 CSNK1G1Q9HCP0 422 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 NAALADL1Q9UQQ1 740 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 HEY1Q9Y5J3 304 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 DOCK4Q8N1I0 1966 aa9.1□□□□□ -0.95
SMAD4-206ENST00000588860 PTPRSQ13332 1948 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 CFAP69A5D8W1 941 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 SMIM23A6NLE4 172 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 HOXA2O43364 376 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 TRAPPC3O43617 180 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 ACSL3O95573 720 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 FYNP06241 537 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 OR4Q2P0C623 313 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 NCAM1P13591 858 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 GOT1P17174 413 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 RPL22P35268 128 aaKnown RBP9.09□□□□□ -0.95
SMAD4-206ENST00000588860 ARL4AP40617 200 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 LMAN1P49257 510 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 CCL23P55773 120 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 SLC29A2Q14542 456 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 MORF4L2Q15014 288 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 TRIM60Q495X7 471 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 EFHC2Q5JST6 749 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 RNASEH2BQ5TBB1 312 aaKnown RBP9.09□□□□□ -0.95
SMAD4-206ENST00000588860 ZNF771Q7L3S4 317 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-206ENST00000588860 BHLHA9Q7RTU4 235 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 BNIPLQ7Z465 357 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 PCGF5Q86SE9 256 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 NPAS4Q8IUM7 802 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 PSTKQ8IV42 348 aaKnown RBP9.09□□□□□ -0.95
SMAD4-206ENST00000588860 PPIL6Q8IXY8 311 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 DCP1BQ8IZD4 617 aaKnown RBP9.09□□□□□ -0.95
SMAD4-206ENST00000588860 PYROXD2Q8N2H3 581 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 TAB3Q8N5C8 712 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-206ENST00000588860 ADAM32Q8TC27 787 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 IRGQQ8WZA9 623 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 EDEM1Q92611 657 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 NT5C3BQ969T7 300 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 CASD1Q96PB1 797 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 CSPG4P5Q96PW8 444 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 COLEC11Q9BWP8 271 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 MAGEB5Q9BZ81 275 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 PPP1R12CQ9BZL4 782 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 ZCWPW1Q9H0M4 648 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 HIPK3Q9H422 1215 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 LRRC4CQ9HCJ2 640 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 SAYSD1Q9NPB0 183 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 TMPRSS4Q9NRS4 437 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 PIGVQ9NUD9 493 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 DDIT4Q9NX09 232 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 ABI2Q9NYB9 513 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-206ENST00000588860 PSD3Q9NYI0 1048 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 RRN3Q9NYV6 651 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 NINJ2Q9NZG7 142 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 RCOR3Q9P2K3 495 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-206ENST00000588860 SHOC2Q9UQ13 582 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 DNAH12Q6ZR08 3092 aa9.09□□□□□ -0.95
SMAD4-206ENST00000588860 MIA3Q5JRA6 1907 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 TLDC2A0PJX2 215 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 TBKBP1A7MCY6 615 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 DCDC2CA8MYV0 355 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 SYN3O14994 580 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 KCNN4O15554 427 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 OAZ2O95190 189 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 NR1D1P20393 614 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 AMPD1P23109 780 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 CYP2C18P33260 490 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 GRIK1P39086 918 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 MAGEA4P43358 317 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 SLC11A1P49279 550 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 GBE1Q04446 702 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 IFRD2Q12894 506 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-206ENST00000588860 SLC39A5Q6ZMH5 540 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 KDM7AQ6ZMT4 941 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 DEFB128Q7Z7B8 93 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 CROCCP2Q86T23 111 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 TAC4Q86UU9 113 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 CEP57Q86XR8 500 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 SCN4BQ8IWT1 228 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 SCML4Q8N228 414 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 EPS8L3Q8TE67 593 aaKnown RBP9.08□□□□□ -0.96
SMAD4-206ENST00000588860 RNF139Q8WU17 664 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 PRCCQ92733 491 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-206ENST00000588860 QKIQ96PU8 341 aaKnown RBP eCLIP9.08□□□□□ -0.966e-6■■■■□ 23.1
SMAD4-206ENST00000588860 RBM15Q96T37 977 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMAD4-206ENST00000588860 TRIM62Q9BVG3 475 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 MRPL9Q9BYD2 267 aaKnown RBP9.08□□□□□ -0.96
SMAD4-206ENST00000588860 PNPLA8Q9NP80 782 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 CWC15Q9P013 229 aaKnown RBP9.08□□□□□ -0.96
SMAD4-206ENST00000588860 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-206ENST00000588860 ADAM28Q9UKQ2 775 aa9.08□□□□□ -0.96
SMAD4-206ENST00000588860 NOVA2Q9UNW9 492 aaKnown RBP9.08□□□□□ -0.96
SMAD4-206ENST00000588860 MFHAS1Q9Y4C4 1052 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms