RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC2-211	ENST00000588652	TEX264	Q9Y6I9	313 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	C2CD2L	O14523	706 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	GABRD	O14764	452 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	CAPN15	O75808	1086 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	BEST1	O76090	585 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	PTPN1	P18031	435 aa	Known RBP	18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	SLC8A3	P57103	927 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	GBE1	Q04446	702 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	SLC10A2	Q12908	348 aa	Predicted RBP	18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	NLRP9	Q7RTR0	991 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	SAPCD2	Q86UD0	394 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	DEFB106A	Q8N104	65 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	NSMCE1	Q8WV22	266 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	NDRG1	Q92597	394 aa	Known RBP	18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	FAM149B1	Q96BN6	582 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	KCTD15	Q96SI1	283 aa	Predicted RBP	18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	FAM105A	Q9NUU6	356 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	ST3GAL5	Q9UNP4	418 aa		18.17	■□□□□ 0.5
ERCC2-211	ENST00000588652	IQANK1	A0A1B0GTG1	560 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	TCRBV9S1A1T	A0A576	114 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	KBTBD13	C9JR72	458 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	KPNA6	O60684	536 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	RARB	P10826	455 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	NPR3	P17342	541 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	CRHR2	Q13324	411 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	NBPF20	Q3BBV1	942 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	SLC25A52	Q3SY17	297 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	PLEKHG4	Q58EX7	1191 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	SLC45A4	Q5BKX6	768 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	SPDYA	Q5MJ70	313 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	CXCL17	Q6UXB2	119 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	ZNF398	Q8TD17	642 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	CSPG4P5	Q96PW8	444 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	MTG1	Q9BT17	334 aa	Predicted RBP	18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	VPS11	Q9H270	941 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	KANSL3	Q9P2N6	904 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	TRPV2	Q9Y5S1	764 aa		18.16	■□□□□ 0.5
ERCC2-211	ENST00000588652	AVIL	O75366	819 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	MT-ND3	P03897	115 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	RPSA	P08865	295 aa	Known RBP	18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	FAM163B	P0C2L3	166 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	ZFX	P17010	805 aa	Predicted RBP	18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	MLH1	P40692	756 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	AFF1	P51825	1210 aa	Known RBP	18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	GJA9	P57773	515 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	CBLB	Q13191	982 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	PTK7	Q13308	1070 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	KIAA0319	Q5VV43	1072 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	GDF6	Q6KF10	455 aa	Predicted RBP	18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	SLC44A1	Q8WWI5	657 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	WNT8B	Q93098	351 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	ETNK2	Q9NVF9	386 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	CBX6	O95503	412 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	TROVE2	P10155	538 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	INHBE	P58166	350 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	MRPS5	P82675	430 aa	Known RBP	18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	KBTBD12	Q3ZCT8	623 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	TAF1B	Q53T94	588 aa	Predicted RBP	18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	FAXC	Q5TGI0	409 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	ZNF449	Q6P9G9	518 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	CLEC20A	Q6ZU45	233 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	FAM131B	Q86XD5	332 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	CDKL3	Q8IVW4	592 aa	Predicted RBP	18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	RFWD2	Q8NHY2	731 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	CCDC110	Q8TBZ0	833 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	PTPRN2	Q92932	1015 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	SERAC1	Q96JX3	654 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	KLC2	Q9H0B6	622 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	SLC38A7	Q9NVC3	462 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	NUMBL	Q9Y6R0	609 aa		18.15	■□□□□ 0.5
ERCC2-211	ENST00000588652	DHRS4L1	P0CG22	281 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	MAGEA6	P43360	314 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	NR2C2	P49116	596 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	SULT1E1	P49888	294 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	NEK3	P51956	506 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	YWHAZ	P63104	245 aa	Known RBP	18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	DCAF6	Q58WW2	860 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	PYROXD2	Q8N2H3	581 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	KCTD13	Q8WZ19	329 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	SENP8	Q96LD8	212 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	GAD1	Q99259	594 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	FRMD8	Q9BZ67	464 aa	Predicted RBP	18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	MANSC1	Q9H8J5	431 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	ZFP69B	Q9UJL9	534 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	USP3	Q9Y6I4	520 aa		18.14	■□□□□ 0.5
ERCC2-211	ENST00000588652	LPXN	O60711	386 aa		18.14	■□□□□ 0.49
ERCC2-211	ENST00000588652	DAB1	O75553	588 aa		18.14	■□□□□ 0.49
ERCC2-211	ENST00000588652	SPAG6	O75602	509 aa		18.14	■□□□□ 0.49
ERCC2-211	ENST00000588652	PGK1	P00558	417 aa		18.14	■□□□□ 0.49
ERCC2-211	ENST00000588652	SLC10A3	P09131	477 aa		18.14	■□□□□ 0.49
ERCC2-211	ENST00000588652	CTSH	P09668	335 aa		18.14	■□□□□ 0.49
ERCC2-211	ENST00000588652	CYBA	P13498	195 aa		18.14	■□□□□ 0.49
ERCC2-211	ENST00000588652	GOT1	P17174	413 aa		18.14	■□□□□ 0.49
ERCC2-211	ENST00000588652	NDUFV1	P49821	464 aa		18.14	■□□□□ 0.49
ERCC2-211	ENST00000588652	RASSF2	P50749	326 aa		18.14	■□□□□ 0.49
ERCC2-211	ENST00000588652	YWHAG	P61981	247 aa	Known RBP eCLIP	18.14	■□□□□ 0.49
ERCC2-211	ENST00000588652	PITX1	P78337	314 aa	Predicted RBP	18.14	■□□□□ 0.49
ERCC2-211	ENST00000588652	FAAP100	Q0VG06	881 aa		18.14	■□□□□ 0.49

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