RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SPOCD1Q6ZMY3 1216 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 PRUNE1Q86TP1 453 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 LRRC52Q8N7C0 313 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 ZNF606Q8WXB4 792 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 EMILIN2Q9BXX0 1053 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 KLHL11Q9NVR0 708 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 BAIAP2L1Q9UHR4 511 aa15.21■□□□□ 0.03
CCDC43-203ENST00000588210 EYSQ5T1H1 3165 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 PI4K2BG5E9Z4 385 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 I3L4J1 428 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 C2CD2LO14523 706 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 PRPF4O43172 522 aaKnown RBP eCLIP15.2■□□□□ 0.02
CCDC43-203ENST00000588210 KRT19P08727 400 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 KRT10P13645 584 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 SKIV2L2P42285 1042 aaKnown RBP15.2■□□□□ 0.02
CCDC43-203ENST00000588210 RPL7AP62424 266 aaKnown RBP15.2■□□□□ 0.02
CCDC43-203ENST00000588210 KCNJ2P63252 427 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 CREMQ03060 361 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 MORF4L2Q15014 288 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 RBM23Q86U06 439 aaKnown RBP15.2■□□□□ 0.02
CCDC43-203ENST00000588210 FITM2Q8N6M3 262 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 GLIS1Q8NBF1 620 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 B3GALT6Q96L58 329 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 RMDN2Q96LZ7 410 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 PPCSQ9HAB8 311 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 SENP1Q9P0U3 644 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 SIX4Q9UIU6 781 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 GGT7Q9UJ14 662 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 MYO7AQ13402 2215 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 ARHGEF37A1IGU5 675 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 ASMTLO95671 621 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 ASS1P00966 412 aaKnown RBP15.2■□□□□ 0.02
CCDC43-203ENST00000588210 TCF4P15884 667 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 TKTP29401 623 aaKnown RBP15.2■□□□□ 0.02
CCDC43-203ENST00000588210 FOXN2P32314 431 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 NRIP1P48552 1158 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 ARSEP51690 589 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 VCPP55072 806 aaKnown RBP15.2■□□□□ 0.02
CCDC43-203ENST00000588210 WDR4P57081 412 aaKnown RBP15.2■□□□□ 0.02
CCDC43-203ENST00000588210 HYAL1Q12794 435 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 OASLQ15646 514 aaKnown RBP15.2■□□□□ 0.02
CCDC43-203ENST00000588210 DUSP6Q16828 381 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 SV2CQ496J9 727 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 ATP13A4Q4VNC1 1196 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 SMYD5Q6GMV2 418 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 DSTYKQ6XUX3 929 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 RGS9BPQ6ZS82 235 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 PLCD3Q8N3E9 789 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 APPL2Q8NEU8 664 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 NKD2Q969F2 451 aaPredicted RBP15.2■□□□□ 0.02
CCDC43-203ENST00000588210 IMPG2Q9BZV3 1241 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 FNIP2Q9P278 1114 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 KLHL14Q9P2G3 628 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 PCDHB8Q9UN66 801 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 SHOC2Q9UQ13 582 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 ZNF148Q9UQR1 794 aa15.2■□□□□ 0.02
CCDC43-203ENST00000588210 hCG_1818297A0A087WSY0 165 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 KPNA7A9QM74 516 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 PER2O15055 1255 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 SPTLC1O15269 473 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 ITGAVP06756 1048 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 CCNB1P14635 433 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 PECAM1P16284 738 aaPredicted RBP15.19■□□□□ 0.02
CCDC43-203ENST00000588210 MGAT5Q09328 741 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 MYO1EQ12965 1108 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 RASA2Q15283 850 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 E2F5Q15329 346 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 PPP1R15BQ5SWA1 713 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 KAZNQ674X7 775 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 DNAJC24Q6P3W2 148 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 ANKS3Q6ZW76 656 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 ASRGL1Q7L266 308 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 NIPA2Q8N8Q9 360 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 SENP8Q96LD8 212 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 KLHL5Q96PQ7 755 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 PCDH9Q9HC56 1237 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 ARHGEF3Q9NR81 526 aa15.19■□□□□ 0.02
CCDC43-203ENST00000588210 DDX56Q9NY93 547 aaKnown RBP15.19■□□□□ 0.02
CCDC43-203ENST00000588210 CNPP09543 421 aaKnown RBP15.18■□□□□ 0.02
CCDC43-203ENST00000588210 CDH5P33151 784 aaPredicted RBP15.18■□□□□ 0.02
CCDC43-203ENST00000588210 GPS1Q13098 491 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 PSMD5Q16401 504 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 RNASEH2BQ5TBB1 312 aaKnown RBP15.18■□□□□ 0.02
CCDC43-203ENST00000588210 GIMAP7Q8NHV1 300 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 DENND1AQ8TEH3 1009 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 KLHL29Q96CT2 875 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 MCEEQ96PE7 176 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 PHACTR1Q9C0D0 580 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 ZNF518BQ9C0D4 1074 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 IGFLR1Q9H665 355 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 SMG5Q9UPR3 1016 aaKnown RBP15.18■□□□□ 0.02
CCDC43-203ENST00000588210 STARD13Q9Y3M8 1113 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 SCN1AP35498 2009 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 VWA8A3KMH1 1905 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 TEX28O15482 410 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 CST3P01034 146 aaPredicted RBP15.18■□□□□ 0.02
CCDC43-203ENST00000588210 ADH1AP07327 375 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 ZSCAN5DPP0CG00 497 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 ODC1P11926 461 aa15.18■□□□□ 0.02
CCDC43-203ENST00000588210 TYMPP19971 482 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms