RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 STC2O76061 302 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 ZFPL1O95159 310 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 NDUFA10O95299 355 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 CRTAMO95727 393 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 PRLP01236 227 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 MMP3P08254 477 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 TGFB3P10600 412 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 SCG2P13521 617 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 CPA1P15085 419 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 HOXB6P17509 224 aaKnown RBP5.2□□□□□ -1.58
ZNF540-204ENST00000586792 XBP1P17861 261 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 GNA11P29992 359 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 RAB27AP51159 221 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 GUCY2FP51841 1108 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 NEK2P51955 445 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 FAM189BP81408 668 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 SLC6A3Q01959 620 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 GHRHRQ02643 423 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 FPGSQ05932 587 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 SQSTM1Q13501 440 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 MTMR1Q13613 665 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 ITGA7Q13683 1181 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 PDE1CQ14123 709 aaPredicted RBP5.2□□□□□ -1.58
ZNF540-204ENST00000586792 NEDD9Q14511 834 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 LY6KQ17RY6 165 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 XRRA1Q6P2D8 792 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 USP17L6PQ6QN14 398 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 ANKRD33Q7Z3H0 272 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 KRT77Q7Z794 578 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 ZSCAN30Q86W11 494 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 TTC30BQ8N4P2 665 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 TMEM199Q8N511 208 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 LILRA3Q8N6C8 439 aaPredicted RBP5.2□□□□□ -1.58
ZNF540-204ENST00000586792 C7orf31Q8N865 590 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 ZNF366Q8N895 744 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 OR52N2Q8NGI0 321 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 ATL2Q8NHH9 583 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 BICD2Q8TD16 824 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 ERP27Q96DN0 273 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 MFSD3Q96ES6 412 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 SPATA33Q96N06 139 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 SLC26A6Q9BXS9 759 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 UPF3BQ9BZI7 483 aaKnown RBP5.2□□□□□ -1.58
ZNF540-204ENST00000586792 TM6SF1Q9BZW5 370 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 MTIF3Q9H2K0 278 aaKnown RBP5.2□□□□□ -1.58
ZNF540-204ENST00000586792 C6orf50Q9HD87 102 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 PDRG1Q9NUG6 133 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 ZNF215Q9UL58 517 aaPredicted RBP5.2□□□□□ -1.58
ZNF540-204ENST00000586792 MSRB2Q9Y3D2 182 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 DAAM1Q9Y4D1 1078 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 LTBP2Q14767 1821 aa5.2□□□□□ -1.58
ZNF540-204ENST00000586792 NID2Q14112 1375 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 SMCO2A6NFE2 343 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 PRRT4C9JH25 899 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 DIRC3C9JPN6 131 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 PDPK1O15530 556 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 NCR1O76036 304 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 ASMTLO95671 621 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 ESRRBO95718 433 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 GGPS1O95749 300 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 IGLV2-14P01704 120 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 MYCLP1P12525 358 aaPredicted RBP5.19□□□□□ -1.58
ZNF540-204ENST00000586792 DDIT3P35638 169 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 ABCG1P45844 678 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 FNTBP49356 437 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 PSMC6P62333 389 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 CCT2P78371 535 aaKnown RBP5.19□□□□□ -1.58
ZNF540-204ENST00000586792 SP4Q02446 784 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 ARHGAP1Q07960 439 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 SSRP1Q08945 709 aaKnown RBP5.19□□□□□ -1.58
ZNF540-204ENST00000586792 STK3Q13188 491 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 PPIGQ13427 754 aaKnown RBP eCLIP5.19□□□□□ -1.58
ZNF540-204ENST00000586792 SIM2Q14190 667 aaPredicted RBP5.19□□□□□ -1.58
ZNF540-204ENST00000586792 MLC1Q15049 377 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 MAN2A1Q16706 1144 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 UBE2SQ16763 222 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 PFKFB3Q16875 520 aaPredicted RBP5.19□□□□□ -1.58
ZNF540-204ENST00000586792 FAM133BQ5BKY9 247 aaKnown RBP5.19□□□□□ -1.58
ZNF540-204ENST00000586792 HYIQ5T013 277 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 PSRC1Q6PGN9 363 aaPredicted RBP5.19□□□□□ -1.58
ZNF540-204ENST00000586792 BRAPQ7Z569 592 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 PLXDC1Q8IUK5 500 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 FBXL16Q8N461 479 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 Q8N9P0 234 aaPredicted RBP5.19□□□□□ -1.58
ZNF540-204ENST00000586792 PPTC7Q8NI37 304 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 AFG1LQ8WV93 481 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 BADQ92934 168 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 ZNF274Q96GC6 653 aaPredicted RBP5.19□□□□□ -1.58
ZNF540-204ENST00000586792 GDF15Q99988 308 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 SDF4Q9BRK5 362 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 HERPUD2Q9BSE4 406 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 DUSP26Q9BV47 211 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 SPATA9Q9BWV2 254 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 RNF26Q9BY78 433 aaPredicted RBP5.19□□□□□ -1.58
ZNF540-204ENST00000586792 CELF4Q9BZC1 486 aaKnown RBP5.19□□□□□ -1.58
ZNF540-204ENST00000586792 HIPK3Q9H422 1215 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 RIC8AQ9NPQ8 531 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 BARHL2Q9NY43 387 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 LUZP4Q9P127 313 aa5.19□□□□□ -1.58
ZNF540-204ENST00000586792 DKK2Q9UBU2 259 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms