RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 HIF1AQ16665 826 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 ARL13BQ3SXY8 428 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 ANKRD22Q5VYY1 191 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 B4GALNT4Q76KP1 1039 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 ZNF771Q7L3S4 317 aaPredicted RBP23.08■■□□□ 1.28
CIRBP-208ENST00000586548 EPS8L3Q8TE67 593 aaKnown RBP23.08■■□□□ 1.28
CIRBP-208ENST00000586548 C9orf72Q96LT7 481 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 TOX2Q96NM4 488 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 TMEM175Q9BSA9 504 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 STMN4Q9H169 189 aaPredicted RBP23.08■■□□□ 1.28
CIRBP-208ENST00000586548 TMPRSS4Q9NRS4 437 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.08■■□□□ 1.28
CIRBP-208ENST00000586548 DTLQ9NZJ0 730 aa23.08■■□□□ 1.28
CIRBP-208ENST00000586548 TLDC2A0PJX2 215 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 OR6C75A6NL08 312 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 HACD1B0YJ81 288 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 EEF2KO00418 725 aaKnown RBP23.07■■□□□ 1.28
CIRBP-208ENST00000586548 ALOX15BO15296 676 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 EIF3HO15372 352 aaKnown RBP eCLIP23.07■■□□□ 1.28
CIRBP-208ENST00000586548 RGS16O15492 202 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-208ENST00000586548 SLC11A1P49279 550 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 CXCR3P49682 368 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 ARL4CP56559 192 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 MAGOHP61326 146 aaKnown RBP23.07■■□□□ 1.28
CIRBP-208ENST00000586548 BASP1P80723 227 aaKnown RBP23.07■■□□□ 1.28
CIRBP-208ENST00000586548 FAAP100Q0VG06 881 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 SEMA3BQ13214 749 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 DPYSQ14117 519 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 FAM171A1Q5VUB5 890 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 ZNF280DQ6N043 979 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 VSTM1Q6UX27 236 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 SCAMP5Q8TAC9 235 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 SERPINB12Q96P63 405 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 OLFM3Q96PB7 478 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 CRISPLD2Q9H0B8 497 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 ETNK2Q9NVF9 386 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 MARCH5Q9NX47 278 aa23.07■■□□□ 1.28
CIRBP-208ENST00000586548 ABI2Q9NYB9 513 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-208ENST00000586548 FNDC1Q4ZHG4 1894 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-208ENST00000586548 MAP3K6O95382 1288 aa23.06■■□□□ 1.28
CIRBP-208ENST00000586548 AGTP01019 485 aa23.06■■□□□ 1.28
CIRBP-208ENST00000586548 FGFR3P22607 806 aa23.06■■□□□ 1.28
CIRBP-208ENST00000586548 HPDP32754 393 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-208ENST00000586548 MNX1P50219 401 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-208ENST00000586548 ZNF135P52742 658 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-208ENST00000586548 NRLP54845 237 aa23.06■■□□□ 1.28
CIRBP-208ENST00000586548 CCL23P55773 120 aa23.06■■□□□ 1.28
CIRBP-208ENST00000586548 ELAVL2Q12926 359 aaKnown RBP23.06■■□□□ 1.28
CIRBP-208ENST00000586548 CTXN3Q4LDR2 81 aa23.06■■□□□ 1.28
CIRBP-208ENST00000586548 KCNT2Q6UVM3 1135 aa23.06■■□□□ 1.28
CIRBP-208ENST00000586548 DQX1Q8TE96 717 aaKnown RBP23.06■■□□□ 1.28
CIRBP-208ENST00000586548 PCDHB5Q9Y5E4 795 aa23.06■■□□□ 1.28
CIRBP-208ENST00000586548 MYO16Q9Y6X6 1858 aa23.06■■□□□ 1.28
CIRBP-208ENST00000586548 MICAL3Q7RTP6 2002 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 SMIM23A6NLE4 172 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 TRIM66O15016 1216 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 CHADO15335 359 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 CREB3O43889 395 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 DGKIO75912 1065 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 IVLP07476 585 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 MAGEA11P43364 429 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 HCAR3P49019 387 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 ATP1A2P50993 1020 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 YWHAGP61981 247 aaKnown RBP eCLIP23.05■■□□□ 1.28
CIRBP-208ENST00000586548 KCNJ11Q14654 390 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 STAT4Q14765 748 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 RFX8Q6ZV50 586 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 TAC4Q86UU9 113 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 C8orf48Q96LL4 319 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 GPR62Q9BZJ7 368 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 PPP1R12CQ9BZL4 782 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 ABCC13Q9NSE7 274 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 WBP1LQ9NX94 342 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 XPO7Q9UIA9 1087 aaKnown RBP23.05■■□□□ 1.28
CIRBP-208ENST00000586548 ZNF638Q14966 1978 aaKnown RBP23.05■■□□□ 1.28
CIRBP-208ENST00000586548 TBKBP1A7MCY6 615 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 E7ESA3 106 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 TMEM63AO94886 807 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 IGLV3-25P01717 112 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 PPP2R2AP63151 447 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 TLE2Q04725 743 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 PDIA2Q13087 525 aaKnown RBP23.05■■□□□ 1.28
CIRBP-208ENST00000586548 AUHQ13825 339 aaKnown RBP23.05■■□□□ 1.28
CIRBP-208ENST00000586548 PAFAH1B3Q15102 231 aaKnown RBP23.05■■□□□ 1.28
CIRBP-208ENST00000586548 TNFAIP8L3Q5GJ75 292 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 C1orf53Q5VUE5 145 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 FUT10Q6P4F1 479 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 SCN4BQ8IWT1 228 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 CCDC77Q9BR77 488 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 WDCPQ9H6R7 721 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 MFHAS1Q9Y4C4 1052 aa23.05■■□□□ 1.28
CIRBP-208ENST00000586548 PLXNA3P51805 1871 aa23.04■■□□□ 1.28
CIRBP-208ENST00000586548 A0A087WUV0 522 aaPredicted RBP23.04■■□□□ 1.28
CIRBP-208ENST00000586548 TCRBV7S3A2A0A539 114 aa23.04■■□□□ 1.28
CIRBP-208ENST00000586548 GOLGA8MH3BSY2 632 aa23.04■■□□□ 1.28
CIRBP-208ENST00000586548 DCLK1O15075 740 aa23.04■■□□□ 1.28
CIRBP-208ENST00000586548 MFSD11O43934 449 aa23.04■■□□□ 1.28
CIRBP-208ENST00000586548 GCATO75600 419 aa23.04■■□□□ 1.28
CIRBP-208ENST00000586548 FASTKD3Q14CZ7 662 aaKnown RBP23.04■■□□□ 1.28
CIRBP-208ENST00000586548 LONRF1Q17RB8 773 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms