RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 TBX4P57082 545 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 ZXDBP98169 803 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 NME3Q13232 169 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 MESDQ14696 234 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 PPP2R5DQ14738 602 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 SND1Q7KZF4 910 aaKnown RBP eCLIP17.65■□□□□ 0.427e-13■■■■■ 28.4
PRKCSH-203ENST00000586486 ARID3BQ8IVW6 561 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 LRRC57Q8N9N7 239 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 USP13Q92995 863 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 FCRL2Q96LA5 508 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 EPS15L1Q9UBC2 864 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 PRUNE2Q8WUY3 3088 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 KIF26AQ9ULI4 1882 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 USP27XA6NNY8 438 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 STC2O76061 302 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 SLC2A3P11169 496 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 LAMP2P13473 410 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 CCR1P32246 355 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 GBP2P32456 591 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 SLC1A1P43005 524 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 NAP1L1P55209 391 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 USP4Q13107 963 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 MTA1Q13330 715 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 FAM78AQ5JUQ0 283 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 BRMS1LQ5PSV4 323 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 NUGGCQ68CJ6 796 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 PTCRAQ6ISU1 281 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 ARFGAP1Q8N6T3 406 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 KIAA1958Q8N8K9 716 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 ADAMTS19Q8TE59 1207 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 PHF7Q9BWX1 381 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 SMPD4Q9NXE4 827 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 TRMT1Q9NXH9 659 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 OBP2AQ9NY56 170 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 CAPN6Q9Y6Q1 641 aa17.65■□□□□ 0.42
PRKCSH-203ENST00000586486 C5orf42Q9H799 3197 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 SYNJ2BP-COX16A0A087WUM0 186 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 GRID2IPA4D2P6 1211 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 MOCS3O95396 460 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 FCARP24071 287 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 RAB6CQ53S08 254 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 SLFN11Q7Z7L1 901 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 CELF5Q8N6W0 485 aaKnown RBP17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 NTAN1Q96AB6 310 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 ACSF2Q96CM8 615 aaPredicted RBP17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 RAB6CQ9H0N0 254 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 SMG9Q9H0W8 520 aaKnown RBP17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 GKN1Q9NS71 199 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 COX16Q9P0S2 106 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 THEGQ9P2T0 379 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 CCL26Q9Y258 94 aa17.64■□□□□ 0.41
PRKCSH-203ENST00000586486 APOEP02649 317 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 MIPP30301 263 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 DEKP35659 375 aaKnown RBP17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 ATXN1P54253 815 aaKnown RBP17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 AIF1P55008 147 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 ZNF77Q15935 545 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 ZC3H12AQ5D1E8 599 aaKnown RBP17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 DAAM2Q86T65 1068 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 FAM131BQ86XD5 332 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 UNC45BQ8IWX7 931 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 SYCE1Q8N0S2 351 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 SH3RF2Q8TEC5 729 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 E2F7Q96AV8 911 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 PRDM6Q9NQX0 595 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 ARHGEF38Q9NXL2 777 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 NR2E1Q9Y466 385 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 ALG6Q9Y672 507 aa17.63■□□□□ 0.41
PRKCSH-203ENST00000586486 TMEM110-MUSTN1A8MSY1 372 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 KCNU1A8MYU2 1149 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 LEFTY2O00292 366 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 GREM1O60565 184 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 PALMO75781 387 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 LATS1O95835 1130 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 HARS2P49590 506 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 KCNQ1P51787 676 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 SLC25A11Q02978 314 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 TFF2Q03403 129 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 SCAPQ12770 1279 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 AAK1Q2M2I8 961 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 CC2D1AQ6P1N0 951 aaPredicted RBP17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 TDRD5Q8NAT2 981 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 TRIM58Q8NG06 486 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 UBE2Q2Q8WVN8 375 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 AZIN2Q96A70 460 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 ALS2CR12Q96Q35 445 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 DCLK3Q9C098 648 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 WDCPQ9H6R7 721 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 CFAP97Q9P2B7 532 aa17.62■□□□□ 0.41
PRKCSH-203ENST00000586486 E2F8A0AVK6 867 aa17.61■□□□□ 0.41
PRKCSH-203ENST00000586486 PRPSAP2O60256 369 aa17.61■□□□□ 0.41
PRKCSH-203ENST00000586486 HMBSP08397 361 aa17.61■□□□□ 0.41
PRKCSH-203ENST00000586486 COMTP21964 271 aa17.61■□□□□ 0.41
PRKCSH-203ENST00000586486 DAB2IPQ5VWQ8 1189 aa17.61■□□□□ 0.41
PRKCSH-203ENST00000586486 Q6ZNB5 142 aa17.61■□□□□ 0.41
PRKCSH-203ENST00000586486 CYP4V2Q6ZWL3 525 aaPredicted RBP17.61■□□□□ 0.41
PRKCSH-203ENST00000586486 HTR3DQ70Z44 454 aa17.61■□□□□ 0.41
PRKCSH-203ENST00000586486 MTSS1LQ765P7 747 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms