RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 HMBSP08397 361 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 ZNF883P0CG24 379 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 C7P10643 843 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 P4HA1P13674 534 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 CORO1AP31146 461 aaKnown RBP12.48□□□□□ -0.41
BRCA1-225ENST00000586385 GOLGA8FQ08AF8 430 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 GOLGA8DPQ0D2H9 430 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 HLA-BQ31612 363 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 KMT5BQ4FZB7 885 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 PPP1R26Q5T8A7 1209 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-225ENST00000586385 FOXD4L5Q5VV16 416 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-225ENST00000586385 BHLHA9Q7RTU4 235 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 CACUL1Q86Y37 369 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 FAM217AQ8IXS0 508 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 TAS1R2Q8TE23 839 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 FOXD4L4Q8WXT5 416 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-225ENST00000586385 SIPA1Q96FS4 1042 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 ZNF396Q96N95 335 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-225ENST00000586385 NT5C1AQ9BXI3 368 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 DUSP16Q9BY84 665 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 MIR1-1HGQ9H1L0 117 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 CCDC86Q9H6F5 360 aaKnown RBP12.48□□□□□ -0.41
BRCA1-225ENST00000586385 GAREM1Q9H706 876 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 ELOVL2Q9NXB9 296 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 CLIC5Q9NZA1 410 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 KIAA1522Q9P206 1035 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-225ENST00000586385 EIF2B4Q9UI10 523 aaKnown RBP12.48□□□□□ -0.41
BRCA1-225ENST00000586385 RAXQ9Y2V3 346 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 PCDHB9Q9Y5E1 797 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 ADAMTS20P59510 1910 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 CELSR3Q9NYQ7 3312 aa12.48□□□□□ -0.41
BRCA1-225ENST00000586385 ACACAQ13085 2346 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 KNL1Q8NG31 2342 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 A0A1B0GVT2 93 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 PDXKO00764 312 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 TRIM49P0CI25 452 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 TRIM49CP0CI26 452 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 CD58P19256 250 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 PIK3CAP42336 1068 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 GCLMP48507 274 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 EFEMP1Q12805 493 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 STARD3Q14849 445 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 FOXD4L6Q3SYB3 417 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-225ENST00000586385 FOXD4L3Q6VB84 417 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-225ENST00000586385 TMPRSS7Q7RTY8 843 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 ANKS1BQ7Z6G8 1248 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 PAGE5Q96GU1 130 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 C6orf106Q9H6K1 298 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-225ENST00000586385 CYP3A43Q9HB55 503 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 TM7SF3Q9NS93 570 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 RASAL2Q9UJF2 1139 aa12.47□□□□□ -0.41
BRCA1-225ENST00000586385 APOBEC2Q9Y235 224 aaKnown RBP12.47□□□□□ -0.41
BRCA1-225ENST00000586385 IGSF10Q6WRI0 2623 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 NPC1O15118 1278 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 SLFN14P0C7P3 912 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 HLA-EP13747 358 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 ACSL1P33121 698 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 CSNK1EP49674 416 aaKnown RBP12.46□□□□□ -0.41
BRCA1-225ENST00000586385 PSEN1P49768 467 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 VAMP7P51809 220 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 ZNF132P52740 706 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 COG7P83436 770 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 CAMK2BQ13554 666 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 CAMK2GQ13555 558 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-225ENST00000586385 KIF19Q2TAC6 998 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 RAB41Q5JT25 222 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 KCNT1Q5JUK3 1230 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 CEP135Q66GS9 1140 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 LAYNQ6UX15 382 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 FAM124AQ86V42 546 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 DENND1CQ8IV53 801 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 ZC3H3Q8IXZ2 948 aaKnown RBP12.46□□□□□ -0.41
BRCA1-225ENST00000586385 CPXM2Q8N436 756 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 SETD7Q8WTS6 366 aaKnown RBP12.46□□□□□ -0.41
BRCA1-225ENST00000586385 HNRNPLLQ8WVV9 542 aaKnown RBP12.46□□□□□ -0.41
BRCA1-225ENST00000586385 NDRG1Q92597 394 aaKnown RBP12.46□□□□□ -0.41
BRCA1-225ENST00000586385 PRCCQ92733 491 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-225ENST00000586385 SEMA4DQ92854 862 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 ORAI3Q9BRQ5 295 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 NUP58Q9BVL2 599 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 NIF3L1Q9GZT8 377 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 TMEM245Q9H330 911 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 TRAF3IP3Q9Y228 551 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 ZNF510Q9Y2H8 683 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 PCDHGB2Q9Y5G2 931 aa12.46□□□□□ -0.41
BRCA1-225ENST00000586385 NUMA1Q14980 2115 aa12.46□□□□□ -0.42
BRCA1-225ENST00000586385 CKAP5Q14008 2032 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 K7ELQ4 463 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-225ENST00000586385 TULP2O00295 520 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 KCNK3O14649 394 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 CER1O95813 267 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 EPHX1P07099 455 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 RALAP11233 206 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 PDIA4P13667 645 aaKnown RBP12.45□□□□□ -0.42
BRCA1-225ENST00000586385 HOXD9P28356 352 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-225ENST00000586385 HLA-FP30511 346 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 OXTRP30559 389 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 CHKAP35790 457 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 MATKP42679 507 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 MCCD1P59942 119 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms