RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 GEN1Q17RS7 908 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 SPDYCQ5MJ68 293 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 TMEM270Q6UE05 265 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 ANKS1BQ7Z6G8 1248 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 FMNL3Q8IVF7 1028 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 SPATA20Q8TB22 786 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 DDI1Q8WTU0 396 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 UCMAQ8WVF2 138 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 PLD4Q96BZ4 506 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 TIGD1Q96MW7 591 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 NT5C1BQ96P26 610 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 METTL14Q9HCE5 456 aaKnown RBP21.38■■□□□ 1.01
TOP3A-219ENST00000584887 FSCN3Q9NQT6 498 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 OLA1Q9NTK5 396 aaKnown RBP21.38■■□□□ 1.01
TOP3A-219ENST00000584887 PILRBQ9UKJ0 227 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 MAN1B1Q9UKM7 699 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 PCDHB4Q9Y5E5 795 aa21.38■■□□□ 1.01
TOP3A-219ENST00000584887 ASCC3Q8N3C0 2202 aaKnown RBP21.38■■□□□ 1.01
TOP3A-219ENST00000584887 O00370 1275 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 GFRA2O00451 464 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 NDUFS2O75306 463 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 LCP1P13796 627 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 ENGP17813 658 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 RGS7P49802 495 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 ZNF33AQ06730 810 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 ZNF252P-AS1Q0IIN9 211 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 PM20D1Q6GTS8 502 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 DHTKD1Q96HY7 919 aaPredicted RBP21.37■■□□□ 1.01
TOP3A-219ENST00000584887 MRGPRX1Q96LB2 322 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 HSPA12BQ96MM6 686 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 CEP63Q96MT8 703 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 GTPBP2Q9BX10 602 aaKnown RBP21.37■■□□□ 1.01
TOP3A-219ENST00000584887 CIPCQ9C0C6 399 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 CD93Q9NPY3 652 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 SFMBT1Q9UHJ3 866 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 FBXO10Q9UK96 956 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 SLC27A6Q9Y2P4 619 aa21.37■■□□□ 1.01
TOP3A-219ENST00000584887 TNRC6BQ9UPQ9 1833 aaKnown RBP21.36■■□□□ 1.01
TOP3A-219ENST00000584887 PIK3R2O00459 728 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 TSPAN3O60637 253 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 SETSIPP0DME0 302 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 CD44P16070 742 aaKnown RBP21.36■■□□□ 1.01
TOP3A-219ENST00000584887 HARS2P49590 506 aaKnown RBP21.36■■□□□ 1.01
TOP3A-219ENST00000584887 ATXN3P54252 364 aaPredicted RBP21.36■■□□□ 1.01
TOP3A-219ENST00000584887 ST3GAL2Q16842 350 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 BSPRYQ5W0U4 402 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 BHLHA9Q7RTU4 235 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 PPM1KQ8N3J5 372 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 UBR7Q8N806 425 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 TRIML1Q8N9V2 468 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 TFAP2BQ92481 460 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 CD248Q9HCU0 757 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 CLEC4EQ9ULY5 219 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 CTNND2Q9UQB3 1225 aa21.36■■□□□ 1.01
TOP3A-219ENST00000584887 CEP192Q8TEP8 1941 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 YJEFN3A6XGL0 299 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 E7ENQ6 273 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 M0QYV0 167 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 BIN1O00499 593 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 MSI1O43347 362 aaKnown RBP21.35■■□□□ 1.01
TOP3A-219ENST00000584887 SYNCRIPO60506 623 aaKnown RBP21.35■■□□□ 1.01
TOP3A-219ENST00000584887 IL12RB1P42701 662 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 ARID5AQ03989 594 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 GFPT1Q06210 699 aaPredicted RBP21.35■■□□□ 1.01
TOP3A-219ENST00000584887 TRIP4Q15650 581 aaPredicted RBP21.35■■□□□ 1.01
TOP3A-219ENST00000584887 DUOXA1Q1HG43 343 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 FUT11Q495W5 492 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 CPXM2Q8N436 756 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 DEFB124Q8NES8 71 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 NELFBQ8WX92 580 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 SORCS1Q8WY21 1168 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 KAT5Q92993 513 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 THAP10Q9P2Z0 257 aaPredicted RBP21.35■■□□□ 1.01
TOP3A-219ENST00000584887 KIAA1257Q9ULG3 409 aa21.35■■□□□ 1.01
TOP3A-219ENST00000584887 CACNA1EQ15878 2313 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 CALCAP01258 141 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 BRD2P25440 801 aaKnown RBP21.34■■□□□ 1.01
TOP3A-219ENST00000584887 HOXD12P35452 270 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 PPP1R2P41236 205 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 CETN1Q12798 172 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 FOXC1Q12948 553 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 SLC23A3Q6PIS1 610 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 CACUL1Q86Y37 369 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 SLC41A1Q8IVJ1 513 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 RGL4Q8IZJ4 473 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 CEP76Q8TAP6 659 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 PIWIL1Q96J94 861 aaKnown RBP21.34■■□□□ 1.01
TOP3A-219ENST00000584887 PRDM16Q9HAZ2 1276 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 SLC6A14Q9UN76 642 aa21.34■■□□□ 1.01
TOP3A-219ENST00000584887 HBS1LQ9Y450 684 aaKnown RBP21.34■■□□□ 1.01
TOP3A-219ENST00000584887 NPC1O15118 1278 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 KRT37O76014 449 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 PAEPP09466 180 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 STX17P56962 302 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 ZNF234Q14588 700 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 MPPE1Q53F39 396 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 TTI2Q6NXR4 508 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 LCLAT1Q6UWP7 414 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 RRAGAQ7L523 313 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 RABEPKQ7Z6M1 372 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms