RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ACO1P21399 889 aaKnown RBP16.45■□□□□ 0.22
SKA2-209ENST00000583976 NTSR1P30989 418 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 LMAN2Q12907 356 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 KCNJ12Q14500 433 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 HTR3DQ70Z44 454 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 TRMT11Q7Z4G4 463 aaKnown RBP16.45■□□□□ 0.22
SKA2-209ENST00000583976 UNC93AQ86WB7 457 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 CRYBG2Q8N1P7 616 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 IPO4Q8TEX9 1081 aaKnown RBP16.45■□□□□ 0.22
SKA2-209ENST00000583976 HSPA12BQ96MM6 686 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 SCNM1Q9BWG6 230 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 IMPG2Q9BZV3 1241 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 FBXO44Q9H4M3 255 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 COMMD8Q9NX08 183 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 MARK1Q9P0L2 795 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 ZMIZ1Q9ULJ6 1067 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 SCML2Q9UQR0 700 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 FAM208BQ5VWN6 2430 aa16.45■□□□□ 0.22
SKA2-209ENST00000583976 HYAL3O43820 417 aaPredicted RBP16.44■□□□□ 0.22
SKA2-209ENST00000583976 RARGP13631 454 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 PRKCSHP14314 528 aaPredicted RBP16.44■□□□□ 0.22
SKA2-209ENST00000583976 ZNF165P49910 485 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 LRMPQ12912 555 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 SLC23A3Q6PIS1 610 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 Q6ZNB5 142 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 SCD5Q86SK9 330 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 CCDC150Q8NCX0 1101 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 TAF4BQ92750 862 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 GATA6Q92908 595 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 HNRNPABQ99729 332 aaKnown RBP16.44■□□□□ 0.22
SKA2-209ENST00000583976 NIF3L1Q9GZT8 377 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 CAPN10Q9HC96 672 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.44■□□□□ 0.22
SKA2-209ENST00000583976 LSM7Q9UK45 103 aaKnown RBP16.44■□□□□ 0.22
SKA2-209ENST00000583976 STARD13Q9Y3M8 1113 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 PKD1L2Q7Z442 2459 aa16.44■□□□□ 0.22
SKA2-209ENST00000583976 WASH3PC4AMC7 463 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 PES1O00541 588 aaKnown RBP16.43■□□□□ 0.22
SKA2-209ENST00000583976 AP5Z1O43299 807 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 STC2O76061 302 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 ATP5C1P36542 298 aaKnown RBP16.43■□□□□ 0.22
SKA2-209ENST00000583976 FAM193AP78312 1265 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 ZNF33AQ06730 810 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 NCAPHQ15003 741 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 ZNF394Q53GI3 561 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 TCP11X2Q5H9J9 407 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 C10orf120Q5SQS8 335 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 KIAA1324Q6UXG2 1013 aaKnown RBP16.43■□□□□ 0.22
SKA2-209ENST00000583976 CACUL1Q86Y37 369 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 DHX40Q8IX18 779 aaKnown RBP16.43■□□□□ 0.22
SKA2-209ENST00000583976 CYFIP2Q96F07 1278 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 GABRG3Q99928 467 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 TUBGCP2Q9BSJ2 902 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 RASAL2Q9UJF2 1139 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 NAGPAQ9UK23 515 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 MUC22E2RYF6 1773 aaPredicted RBP16.43■□□□□ 0.22
SKA2-209ENST00000583976 DMXL2Q8TDJ6 3036 aa16.43■□□□□ 0.22
SKA2-209ENST00000583976 CILPO75339 1184 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 KLKB1P03952 638 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 HMBSP08397 361 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 CDK11BP21127 795 aaKnown RBP16.42■□□□□ 0.22
SKA2-209ENST00000583976 DGKGP49619 791 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 KIF11P52732 1056 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 GOLGA8FQ08AF8 430 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 GOLGA8DPQ0D2H9 430 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 CETN1Q12798 172 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 SEMA3BQ13214 749 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 BYSLQ13895 437 aaKnown RBP16.42■□□□□ 0.22
SKA2-209ENST00000583976 MAN2A1Q16706 1144 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 PPP1R26Q5T8A7 1209 aaPredicted RBP16.42■□□□□ 0.22
SKA2-209ENST00000583976 CDKAL1Q5VV42 579 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 PIP4P1Q86T03 277 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 MINDY1Q8N5J2 469 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 KCNV2Q8TDN2 545 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 TATDN2Q93075 761 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 MRGPRX1Q96LB2 322 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 XPO6Q96QU8 1125 aaKnown RBP16.42■□□□□ 0.22
SKA2-209ENST00000583976 ARID3AQ99856 593 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 BPIFA3Q9BQP9 254 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 NT5C1AQ9BXI3 368 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 TAB2Q9NYJ8 693 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 KLK13Q9UKR3 277 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 COQ4Q9Y3A0 265 aa16.42■□□□□ 0.22
SKA2-209ENST00000583976 SMTNL1A8MU46 457 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 BECN2A8MW95 431 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 P4HA2O15460 535 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 CISD3P0C7P0 127 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 EEF1GP26641 437 aaKnown RBP16.41■□□□□ 0.22
SKA2-209ENST00000583976 HOXD12P35452 270 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 ATXN3P54252 364 aaPredicted RBP16.41■□□□□ 0.22
SKA2-209ENST00000583976 SIM1P81133 766 aaPredicted RBP16.41■□□□□ 0.22
SKA2-209ENST00000583976 GEN1Q17RS7 908 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 DUOXA1Q1HG43 343 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 PREPLQ4J6C6 727 aaPredicted RBP16.41■□□□□ 0.22
SKA2-209ENST00000583976 VWA3BQ502W6 1294 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 SPDYCQ5MJ68 293 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 SLC36A4Q6YBV0 504 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 CCDC186Q7Z3E2 898 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 CRACR2AQ9BSW2 395 aa16.41■□□□□ 0.22
SKA2-209ENST00000583976 VPS16Q9H269 839 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms