RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 SLC1A1P43005 524 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 CXCR3P49682 368 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 AIF1P55008 147 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 HDAC4P56524 1084 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 TBX4P57082 545 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 PITX1P78337 314 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-207ENST00000583965 NME3Q13232 169 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 PPP2R5DQ14738 602 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 SMAD2Q15796 467 aaKnown RBP12.13□□□□□ -0.47
CDRT1-207ENST00000583965 CDO1Q16878 200 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 AAK1Q2M2I8 961 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 OTUD1Q5VV17 481 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-207ENST00000583965 NUGGCQ68CJ6 796 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 DAAM2Q86T65 1068 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 MIB1Q86YT6 1006 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 ARID3BQ8IVW6 561 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-207ENST00000583965 SYCE1Q8N0S2 351 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 ZSCAN18Q8TBC5 510 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-207ENST00000583965 ADAM32Q8TC27 787 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 SMARCD2Q92925 531 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 E2F7Q96AV8 911 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 ACSF2Q96CM8 615 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-207ENST00000583965 SLC39A13Q96H72 371 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 BTBD6Q96KE9 485 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 ZFRQ96KR1 1074 aaKnown RBP12.13□□□□□ -0.47
CDRT1-207ENST00000583965 ZSWIM3Q96MP5 696 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 ASB16Q96NS5 453 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 ALS2CR12Q96Q35 445 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 DCLK3Q9C098 648 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 PIGVQ9NUD9 493 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDRT1-207ENST00000583965 TRMT1Q9NXH9 659 aaKnown RBP12.13□□□□□ -0.47
CDRT1-207ENST00000583965 OBP2AQ9NY56 170 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 CPQQ9Y646 472 aa12.13□□□□□ -0.47
CDRT1-207ENST00000583965 MIA3Q5JRA6 1907 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 MSI1O43347 362 aaKnown RBP12.12□□□□□ -0.47
CDRT1-207ENST00000583965 LRCH4O75427 683 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 STC2O76061 302 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 MOCS3O95396 460 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 LATS1O95835 1130 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 APOEP02649 317 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 GBP2P32456 591 aaPredicted RBP12.12□□□□□ -0.47
CDRT1-207ENST00000583965 HARS2P49590 506 aaKnown RBP12.12□□□□□ -0.47
CDRT1-207ENST00000583965 HADHQ16836 314 aaKnown RBP12.12□□□□□ -0.47
CDRT1-207ENST00000583965 ACBD5Q5T8D3 534 aaPredicted RBP12.12□□□□□ -0.47
CDRT1-207ENST00000583965 PTCRAQ6ISU1 281 aaPredicted RBP12.12□□□□□ -0.47
CDRT1-207ENST00000583965 MTSS1LQ765P7 747 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 SLFN11Q7Z7L1 901 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 CELF5Q8N6W0 485 aaKnown RBP12.12□□□□□ -0.47
CDRT1-207ENST00000583965 LRRC57Q8N9N7 239 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 TRIM58Q8NG06 486 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 USP13Q92995 863 aaPredicted RBP12.12□□□□□ -0.47
CDRT1-207ENST00000583965 RNF34Q969K3 372 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 AZIN2Q96A70 460 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 FCRL2Q96LA5 508 aaPredicted RBP12.12□□□□□ -0.47
CDRT1-207ENST00000583965 MYADMQ96S97 322 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 PHF7Q9BWX1 381 aaPredicted RBP12.12□□□□□ -0.47
CDRT1-207ENST00000583965 ADAM33Q9BZ11 813 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 WDCPQ9H6R7 721 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 CALCOCO1Q9P1Z2 691 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 EPS15L1Q9UBC2 864 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 SLC12A6Q9UHW9 1150 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 LSM7Q9UK45 103 aaKnown RBP12.12□□□□□ -0.47
CDRT1-207ENST00000583965 ZNF510Q9Y2H8 683 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 NR2E1Q9Y466 385 aa12.12□□□□□ -0.47
CDRT1-207ENST00000583965 TCF20Q9UGU0 1960 aaKnown RBP12.12□□□□□ -0.47
CDRT1-207ENST00000583965 NUP205Q92621 2012 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 CHD5Q8TDI0 1954 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 SYNJ2BP-COX16A0A087WUM0 186 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 E2F8A0AVK6 867 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 GRID2IPA4D2P6 1211 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 LEFTY2O00292 366 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 SPOPO43791 374 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 PRPSAP2O60256 369 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 PALMO75781 387 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 LAMP2P13473 410 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 MIPP30301 263 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 USP4Q13107 963 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 ARL13BQ3SXY8 428 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 FAM78AQ5JUQ0 283 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 SH3PXD2AQ5TCZ1 1133 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 CC2D1AQ6P1N0 951 aaPredicted RBP12.11□□□□□ -0.47
CDRT1-207ENST00000583965 POTEHQ6S545 545 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 PSTKQ8IV42 348 aaKnown RBP12.11□□□□□ -0.47
CDRT1-207ENST00000583965 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 ATP6V0D2Q8N8Y2 350 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 SH3RF2Q8TEC5 729 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 NTAN1Q96AB6 310 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 BTN2A3PQ96KV6 586 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 ZFP14Q9HCL3 533 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 GKN1Q9NS71 199 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 SMPD4Q9NXE4 827 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 ARHGEF38Q9NXL2 777 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 COX16Q9P0S2 106 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 THEGQ9P2T0 379 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 USP18Q9UMW8 372 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 SH3BP1Q9Y3L3 701 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 ALG6Q9Y672 507 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 CAPN6Q9Y6Q1 641 aa12.11□□□□□ -0.47
CDRT1-207ENST00000583965 TICRRQ7Z2Z1 1910 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms