RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 KCNK16Q96T55 309 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 ACOX2Q99424 681 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 PLCD4Q9BRC7 762 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 B3GNT5Q9BYG0 378 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 ZDHHC5Q9C0B5 715 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 SNX25Q9H3E2 840 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 ALG2Q9H553 416 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 CD248Q9HCU0 757 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 OLFML3Q9NRN5 406 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 CCDC39Q9UFE4 941 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 SUSD2Q9UGT4 822 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 APOBEC2Q9Y235 224 aaKnown RBP5.65□□□□□ -1.5
VAPA-207ENST00000583879 SH3BP1Q9Y3L3 701 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 NME7Q9Y5B8 376 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 EML5Q05BV3 1969 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 A0A1B0GTW7 788 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 FRMD3A2A2Y4 597 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 A8MXQ7 604 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 PRRT4C9JH25 899 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 GFRA2O00451 464 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 CLDN5O00501 218 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 PRPF6O94906 941 aaKnown RBP5.64□□□□□ -1.51
VAPA-207ENST00000583879 RTN3O95197 1032 aaPredicted RBP5.64□□□□□ -1.51
VAPA-207ENST00000583879 CISD3P0C7P0 127 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 ZDHHC11BP0C7U3 371 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 IDEP14735 1019 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 GATA4P43694 442 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 TUBP50607 506 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 IFRD2Q12894 506 aaPredicted RBP5.64□□□□□ -1.51
VAPA-207ENST00000583879 WDR72Q3MJ13 1102 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 WDR45BQ5MNZ6 344 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 EGFLAMQ63HQ2 1017 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 LARP1BQ659C4 914 aaKnown RBP5.64□□□□□ -1.51
VAPA-207ENST00000583879 GRAMD4Q6IC98 578 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 FIGNL1Q6PIW4 674 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 DBX2Q6ZNG2 339 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 CHSY3Q70JA7 882 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 HTR3DQ70Z44 454 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 TMPRSS7Q7RTY8 843 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 CBWD2Q8IUF1 395 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 WDR49Q8IV35 697 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 ABCA7Q8IZY2 2146 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 PLPP7Q8NBV4 271 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 CADM4Q8NFZ8 388 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 SCAMP5Q8TAC9 235 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 MDM1Q8TC05 714 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 DNASE2BQ8WZ79 361 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 WBP2Q969T9 261 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 LRIG1Q96JA1 1093 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 TMX3Q96JJ7 454 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 MRGPRX1Q96LB2 322 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 BBC3Q96PG8 261 aaPredicted RBP5.64□□□□□ -1.51
VAPA-207ENST00000583879 XPO6Q96QU8 1125 aaKnown RBP5.64□□□□□ -1.51
VAPA-207ENST00000583879 GABRG3Q99928 467 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 FGFBP2Q9BYJ0 223 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 ZNF518BQ9C0D4 1074 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 ELOVL4Q9GZR5 314 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 DPEP3Q9H4B8 488 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 CCSER2Q9H7U1 834 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 KIAA1586Q9HCI6 787 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 ITM2CQ9NQX7 267 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 NDFIP2Q9NV92 336 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 TMEM30AQ9NV96 361 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 PANK4Q9NVE7 773 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 DNAJC17Q9NVM6 304 aaKnown RBP5.64□□□□□ -1.51
VAPA-207ENST00000583879 COMMD8Q9NX08 183 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 IL37Q9NZH6 218 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 WDR35Q9P2L0 1181 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 DKK4Q9UBT3 224 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 PCOLCE2Q9UKZ9 415 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 CYP8B1Q9UNU6 501 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 HRH3Q9Y5N1 445 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 BAHCC1Q9P281 2608 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 PTPRJQ12913 1337 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 KIF26AQ9ULI4 1882 aaPredicted RBP5.64□□□□□ -1.51
VAPA-207ENST00000583879 DMXL2Q8TDJ6 3036 aa5.64□□□□□ -1.51
VAPA-207ENST00000583879 SCO2A0A1W2PP80 73 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 FAM92AA1XBS5 289 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 TRABD2BA6NFA1 517 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 METTL12A8MUP2 240 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 WASH3PC4AMC7 463 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 NEDD8-MDP1E9PL57 170 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 CACNG3O60359 315 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 GREM1O60565 184 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 STAU1O95793 577 aaKnown RBP5.63□□□□□ -1.51
VAPA-207ENST00000583879 CENPBP07199 599 aaPredicted RBP5.63□□□□□ -1.51
VAPA-207ENST00000583879 ZNF883P0CG24 379 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 TYRP14679 529 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 TNNI1P19237 187 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 CD6P30203 668 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 ATP5C1P36542 298 aaKnown RBP5.63□□□□□ -1.51
VAPA-207ENST00000583879 ZNF132P52740 706 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 SLC5A3P53794 718 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 TNNC1P63316 161 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 GRIK2Q13002 908 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 CCDC73Q6ZRK6 1079 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 TPGS1Q6ZTW0 290 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 PAQR9Q6ZVX9 377 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 BRAPQ7Z569 592 aa5.63□□□□□ -1.51
VAPA-207ENST00000583879 B3GALNT2Q8NCR0 500 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms