RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 IGSF8Q969P0 613 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 ELMO3Q96BJ8 720 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 P2RY11Q96G91 374 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 CIPCQ9C0C6 399 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 SDCBP2Q9H190 292 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 C6orf106Q9H6K1 298 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-215ENST00000583328 NMUR1Q9HB89 426 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 FAM49BQ9NUQ9 324 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.93□□□□□ -0.34
TOP3A-215ENST00000583328 SLCO1B1Q9Y6L6 691 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 KNTC1P50748 2209 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 CABIN1Q9Y6J0 2220 aa12.93□□□□□ -0.34
TOP3A-215ENST00000583328 ATXN7O15265 892 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-215ENST00000583328 TIMM44O43615 452 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 CYBBP04839 570 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 RALAP11233 206 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 P4HA1P13674 534 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 TRIM21P19474 475 aaKnown RBP12.92□□□□□ -0.34
TOP3A-215ENST00000583328 PRKCHP24723 683 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 ACSL1P33121 698 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 CASP4P49662 377 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 NDST1P52848 882 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 SNRPFP62306 86 aaKnown RBP12.92□□□□□ -0.34
TOP3A-215ENST00000583328 ASIC1P78348 528 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 NUCB2P80303 420 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 COG7P83436 770 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 NCOA4Q13772 614 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 BMT2Q1RMZ1 405 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 INAVAQ3KP66 663 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 FOXD4L5Q5VV16 416 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-215ENST00000583328 SERPINA13PQ6UXR4 307 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 GPRIN1Q7Z2K8 1008 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 ADAT2Q7Z6V5 191 aaKnown RBP12.92□□□□□ -0.34
TOP3A-215ENST00000583328 ZNF605Q86T29 641 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 CRYBG2Q8N1P7 616 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 C12orf29Q8N999 325 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 OR2T3Q8NH03 318 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 FOXD4L4Q8WXT5 416 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-215ENST00000583328 SORCS1Q8WY21 1168 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 PIWIL1Q96J94 861 aaKnown RBP12.92□□□□□ -0.34
TOP3A-215ENST00000583328 DCLK3Q9C098 648 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 GZF1Q9H116 711 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-215ENST00000583328 LHX5Q9H2C1 402 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 TNMDQ9H2S6 317 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 TM9SF3Q9HD45 589 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 OSGEPQ9NPF4 335 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 FTSJ1Q9UET6 329 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 NAGPAQ9UK23 515 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 PCDHA5Q9Y5H7 936 aa12.92□□□□□ -0.34
TOP3A-215ENST00000583328 SETXQ7Z333 2677 aaKnown RBP12.92□□□□□ -0.34
TOP3A-215ENST00000583328 LOC400499M0QZD8 3231 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 PTPRBP23467 1997 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 CELSR3Q9NYQ7 3312 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 HELZ2Q9BYK8 2649 aaKnown RBP12.91□□□□□ -0.34
TOP3A-215ENST00000583328 H0Y8X5 98 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 PCDHGA12O60330 932 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 EXOC3O60645 756 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 C1QL1O75973 258 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 KLKB1P03952 638 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 HMBSP08397 361 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 CORO1AP31146 461 aaKnown RBP12.91□□□□□ -0.34
TOP3A-215ENST00000583328 GRIA4P48058 902 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 AP3M2P53677 418 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 IL9RQ01113 521 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 AMPD3Q01432 767 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 EIF4HQ15056 248 aaKnown RBP12.91□□□□□ -0.34
TOP3A-215ENST00000583328 FAM26FQ5R3K3 315 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 C6orf118Q5T5N4 469 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 FAM173BQ6P4H8 233 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 LAYNQ6UX15 382 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 EPM2AIP1Q7L775 607 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-215ENST00000583328 UNC93AQ86WB7 457 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 NXPE2Q96DL1 559 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-215ENST00000583328 BTBD1Q9H0C5 482 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 PRORYQ9H606 182 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 RASAL2Q9UJF2 1139 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 CLEC4EQ9ULY5 219 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-215ENST00000583328 ZDHHC9Q9Y397 364 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 AK5Q9Y6K8 562 aa12.91□□□□□ -0.34
TOP3A-215ENST00000583328 HHLA1C9JL84 531 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 RRP8O43159 456 aaKnown RBP12.9□□□□□ -0.34
TOP3A-215ENST00000583328 DFNA5O60443 496 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 FSBPO95073 299 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 KIF20AO95235 890 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 SEMA4FO95754 770 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 C4BPAP04003 597 aaKnown RBP12.9□□□□□ -0.34
TOP3A-215ENST00000583328 HNF1BP35680 557 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 PSEN1P49768 467 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 SEMG2Q02383 582 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 SGSM1Q2NKQ1 1148 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 CLEC20AQ6ZU45 233 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 SCD5Q86SK9 330 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 LSM14AQ8ND56 463 aaKnown RBP12.9□□□□□ -0.34
TOP3A-215ENST00000583328 PLEKHO2Q8TD55 490 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 DDI1Q8WTU0 396 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 BIRC7Q96CA5 298 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 IPO9Q96P70 1041 aaKnown RBP12.9□□□□□ -0.34
TOP3A-215ENST00000583328 CDK5RAP1Q96SZ6 601 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms