RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	LHX5	Q9H2C1	402 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	BOLA2	Q9H3K6	86 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	KAT14	Q9H8E8	782 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	TBC1D22B	Q9NU19	505 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	UXT	Q9UBK9	157 aa	Predicted RBP	5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	MAD2L2	Q9UI95	211 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	ST6GALNAC2	Q9UJ37	374 aa		5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	OAS3	Q9Y6K5	1087 aa	Known RBP	5.33	□□□□□ -1.56
MSI2-216	ENST00000582772	VWF	P04275	2813 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	SPDYE3	A6NKU9	549 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772		M0QZQ0	153 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	PODXL	O00592	558 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	E2F3	O00716	465 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	ASAP2	O43150	1006 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	CACNG3	O60359	315 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	OLFM2	O95897	454 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	TCN2	P20062	427 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	KIR3DL1	P43629	444 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	RECQL	P46063	649 aa	Predicted RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	CCR5	P51681	352 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	DEFA6	Q01524	100 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	MBTD1	Q05BQ5	628 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	SOX4	Q06945	474 aa	Predicted RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	ZFP36L1	Q07352	338 aa	Known RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	LAMTOR4	Q0VGL1	99 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	TAF12	Q16514	161 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	CDKN3	Q16667	212 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	LONRF1	Q17RB8	773 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	LY6G5C	Q5SRR4	150 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	GRAMD4	Q6IC98	578 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	MRGPRG	Q86SM5	289 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	FJX1	Q86VR8	437 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	CLASRP	Q8N2M8	674 aa	Known RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	KBTBD3	Q8NAB2	608 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	C2orf15	Q8WU43	125 aa	Known RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	SCFD1	Q8WVM8	642 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	PRPF31	Q8WWY3	499 aa	Known RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	PSPC1	Q8WXF1	523 aa	Known RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	JPH3	Q8WXH2	748 aa	Predicted RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	IFT43	Q96FT9	208 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	CMKLR1	Q99788	373 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	ANP32E	Q9BTT0	268 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	API5	Q9BZZ5	524 aa	Known RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	RPF1	Q9H9Y2	349 aa	Known RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	GPN2	Q9H9Y4	310 aa	Predicted RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	GOLGA2P5	Q9HBQ8	144 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	KLHL11	Q9NVR0	708 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	MAP10	Q9P2G4	905 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	TBC1D14	Q9P2M4	693 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	THAP10	Q9P2Z0	257 aa	Predicted RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	SALL4	Q9UJQ4	1053 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	OSGIN2	Q9Y236	505 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	POLH	Q9Y253	713 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	PCDHB5	Q9Y5E4	795 aa		5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	TIMM13	Q9Y5L4	95 aa	Predicted RBP	5.32	□□□□□ -1.56
MSI2-216	ENST00000582772	NYNRIN	Q9P2P1	1898 aa	Known RBP	5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	TARSL2	A2RTX5	802 aa	Known RBP	5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	SFI1	A8K8P3	1242 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	KDM4E	B2RXH2	506 aa	Predicted RBP	5.31	□□□□□ -1.56
MSI2-216	ENST00000582772		K7ELQ4	463 aa	Predicted RBP	5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	SH2B2	O14492	632 aa	Predicted RBP	5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	TRIM24	O15164	1050 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	CASC3	O15234	703 aa	Known RBP	5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	LAT	O43561	262 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	NOL4	O94818	638 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	SRGAP2C	P0DJJ0	459 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	CSH1	P0DML2	217 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	CSH2	P0DML3	217 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	NFKBIA	P25963	317 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	RPL9	P32969	192 aa	Known RBP	5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	SPAM1	P38567	509 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	SLC7A9	P82251	487 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	CAMK2G	Q13555	558 aa	Predicted RBP	5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	KCNJ12	Q14500	433 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	KCNB1	Q14721	858 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	E2F5	Q15329	346 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	UGCG	Q16739	394 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	XKR4	Q5GH76	650 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	XKR3	Q5GH77	459 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	ATP1A1-AS1	Q5TC04	95 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	NAPEPLD	Q6IQ20	393 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	XKRX	Q6PP77	449 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	USP30	Q70CQ3	517 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	CAMKMT	Q7Z624	323 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	KRTAP1-3	Q8IUG1	177 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	RNF149	Q8NC42	400 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	OR2T3	Q8NH03	318 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	KIAA1143	Q96AT1	154 aa	Predicted RBP	5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	SEPT5	Q99719	369 aa	Predicted RBP	5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	CCDC3	Q9BQI4	270 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	C19orf24	Q9BVV8	132 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	TRIM9	Q9C026	710 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	FBRS	Q9HAH7	460 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	PCDHA6	Q9UN73	950 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	PPME1	Q9Y570	386 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	CMYA5	Q8N3K9	4069 aa		5.31	□□□□□ -1.56
MSI2-216	ENST00000582772	IGLV3-22	A0A075B6J6	115 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	CPED1	A4D0V7	1026 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	C2orf78	A6NCI8	922 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	TLCD2	A6NGC4	264 aa		5.3	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms