RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 RBAKQ9NYW8 714 aaPredicted RBP10.87□□□□□ -0.67
SS18-221ENST00000582448 AIPL1Q9NZN9 384 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 APEX2Q9UBZ4 518 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 FBXO4Q9UKT5 387 aa10.87□□□□□ -0.67
SS18-221ENST00000582448 R3HCC1Q9Y3T6 440 aaKnown RBP10.87□□□□□ -0.67
SS18-221ENST00000582448 ZFP37Q9Y6Q3 630 aaPredicted RBP10.87□□□□□ -0.67
SS18-221ENST00000582448 WDR81Q562E7 1941 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 DNAH14Q0VDD8 3507 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 A0A0B4J269 797 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 EPHB6O15197 1021 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 B4GALT5O43286 388 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 CLSTN1O94985 981 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 FOSL1P15407 271 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 TNNI1P19237 187 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 SDHBP21912 280 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 GNA15P30679 374 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 CASQ1P31415 396 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 EIF4A3P38919 411 aaKnown RBP10.86□□□□□ -0.67
SS18-221ENST00000582448 KIF11P52732 1056 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 MFAP3P55082 362 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 PTENP60484 403 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 GNG11P61952 73 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 ETF1P62495 437 aaKnown RBP10.86□□□□□ -0.67
SS18-221ENST00000582448 PFKPQ01813 784 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 CREMQ03060 361 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 PRKCQQ04759 706 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 PSMD6Q15008 389 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 ZNF528Q3MIS6 628 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 CBWD6Q4V339 395 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 ZC3H12AQ5D1E8 599 aaKnown RBP10.86□□□□□ -0.67
SS18-221ENST00000582448 CBWD3Q5JTY5 395 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 CBWD5Q5RIA9 395 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 ATF7IP2Q5U623 682 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 SLC39A4Q6P5W5 647 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 WDR59Q6PJI9 974 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 TPRG1Q6ZUI0 275 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 REXO1L1PQ8IX06 675 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 GSTCDQ8NEC7 633 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 FBXL13Q8NEE6 735 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 PARD3BQ8TEW8 1205 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 MCRS1Q96EZ8 462 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 CLSTN3Q9BQT9 956 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 TTPALQ9BTX7 342 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.86□□□□□ -0.67
SS18-221ENST00000582448 CCDC113Q9H0I3 377 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 LTB4R2Q9NPC1 389 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 LZTFL1Q9NQ48 299 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 HCFC1R1Q9NWW0 138 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 ZSCAN32Q9NX65 697 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 MYO1AQ9UBC5 1043 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 FBXW11Q9UKB1 542 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 DNAJC12Q9UKB3 198 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 SMG5Q9UPR3 1016 aaKnown RBP10.86□□□□□ -0.67
SS18-221ENST00000582448 ARID2Q68CP9 1835 aa10.86□□□□□ -0.67
SS18-221ENST00000582448 SF3B1O75533 1304 aaKnown RBP eCLIP10.85□□□□□ -0.674e-6■■■■■ 96
SS18-221ENST00000582448 CACNA1IQ9P0X4 2223 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 LRRIQ3A6PVS8 624 aaPredicted RBP10.85□□□□□ -0.67
SS18-221ENST00000582448 OGTO15294 1046 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 NCAM2O15394 837 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 ADAM12O43184 909 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 ADRB2P07550 413 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 HARSP12081 509 aaKnown RBP10.85□□□□□ -0.67
SS18-221ENST00000582448 TERF1P54274 439 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 DLG4P78352 724 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 ARID5AQ03989 594 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 MBTD1Q05BQ5 628 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 PPP3CAQ08209 521 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 GRIK3Q13003 919 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 BIRC3Q13489 604 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 PCBP1Q15365 356 aaKnown RBP eCLIP10.85□□□□□ -0.67
SS18-221ENST00000582448 PSMD5Q16401 504 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 MSMPQ1L6U9 139 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 ZNF568Q3ZCX4 644 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 C10orf76Q5T2E6 689 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 MPZL3Q6UWV2 235 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 ZNF765Q7L2R6 523 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 ACRBPQ8NEB7 543 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 LNX1Q8TBB1 728 aaPredicted RBP10.85□□□□□ -0.67
SS18-221ENST00000582448 SLC7A14Q8TBB6 771 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 JAKMIP2Q96AA8 810 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 NT5C1BQ96P26 610 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 ACO2Q99798 780 aaKnown RBP10.85□□□□□ -0.67
SS18-221ENST00000582448 PLA2G2FQ9BZM2 168 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 IMPG2Q9BZV3 1241 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 FZD8Q9H461 694 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 GMEB2Q9UKD1 530 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 NDRG2Q9UN36 371 aaKnown RBP10.85□□□□□ -0.67
SS18-221ENST00000582448 TNFSF13BQ9Y275 285 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 PCDHGA2Q9Y5H1 932 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 FHOD1Q9Y613 1164 aa10.85□□□□□ -0.67
SS18-221ENST00000582448 PRR5-ARHGAP8B1AHC4 643 aa10.84□□□□□ -0.67
SS18-221ENST00000582448 GFPT2O94808 682 aa10.84□□□□□ -0.67
SS18-221ENST00000582448 C1RP00736 705 aa10.84□□□□□ -0.67
SS18-221ENST00000582448 HNRNPA1P09651 372 aaKnown RBP eCLIP10.84□□□□□ -0.67
SS18-221ENST00000582448 OR1D2P34982 312 aa10.84□□□□□ -0.67
SS18-221ENST00000582448 SOX5P35711 763 aa10.84□□□□□ -0.67
SS18-221ENST00000582448 ACOT2P49753 483 aa10.84□□□□□ -0.67
SS18-221ENST00000582448 VAV2P52735 878 aa10.84□□□□□ -0.67
SS18-221ENST00000582448 ARHGAP8P85298 464 aa10.84□□□□□ -0.67
SS18-221ENST00000582448 MCL1Q07820 350 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms