RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 YWHAZP63104 245 aaKnown RBP13.1□□□□□ -0.31
SRSF1-204ENST00000581979 PPP2R5EQ16537 467 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 SMTNL2Q2TAL5 461 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 SH3PXD2AQ5TCZ1 1133 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 SCYL2Q6P3W7 929 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 SCN4BQ8IWT1 228 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 DEFB106AQ8N104 65 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 FUBP3Q96I24 572 aaKnown RBP eCLIP13.1□□□□□ -0.31
SRSF1-204ENST00000581979 PGLYRP2Q96PD5 576 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 SLITRK1Q96PX8 696 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 PNKPQ96T60 521 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 OXCT2Q9BYC2 517 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-204ENST00000581979 DDX47Q9H0S4 455 aaKnown RBP13.1□□□□□ -0.31
SRSF1-204ENST00000581979 PNPLA8Q9NP80 782 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 PCDHB5Q9Y5E4 795 aa13.1□□□□□ -0.31
SRSF1-204ENST00000581979 CACNA1HO95180 2353 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 LRRD1A4D1F6 860 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 ANHXE9PGG2 379 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 PRPSAP2O60256 369 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 ZBED1O96006 694 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 TUBBP07437 444 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 GLI1P08151 1106 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 RALAP11233 206 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 FSHRP23945 695 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 MCM3P25205 808 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 IL1R2P27930 398 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 MATKP42679 507 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 SULT1E1P49888 294 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 MRPS25P82663 173 aaKnown RBP13.09□□□□□ -0.31
SRSF1-204ENST00000581979 TCF15Q12870 199 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 KCNT1Q5JUK3 1230 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 GRASPQ7Z6J2 395 aaPredicted RBP13.09□□□□□ -0.31
SRSF1-204ENST00000581979 CCDC26Q8TAB7 109 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 ZNF461Q8TAF7 563 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 SLC7A14Q8TBB6 771 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 HSPH1Q92598 858 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 DDX23Q9BUQ8 820 aaKnown RBP13.09□□□□□ -0.31
SRSF1-204ENST00000581979 OSBPL8Q9BZF1 889 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 SLITRK6Q9H5Y7 841 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 POPDC2Q9HBU9 364 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 MYO16Q9Y6X6 1858 aa13.09□□□□□ -0.31
SRSF1-204ENST00000581979 TCRBV7S2A1N4TA0A589 114 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 CAPN9O14815 690 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 TRIM66O15016 1216 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 PHF2O75151 1096 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 XYLBO75191 536 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 ABLIM3O94929 683 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 NOS2P35228 1153 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 CLCN5P51795 746 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 COPS2P61201 443 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 SLC7A5Q01650 507 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 IFRD2Q12894 506 aaPredicted RBP13.08□□□□□ -0.32
SRSF1-204ENST00000581979 RAB6CQ53S08 254 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 DCAF6Q58WW2 860 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 KAZNQ674X7 775 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 MFSD7Q6UXD7 560 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 SPOCD1Q6ZMY3 1216 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 GET4Q7L5D6 327 aaPredicted RBP13.08□□□□□ -0.32
SRSF1-204ENST00000581979 SLC44A3Q8N4M1 653 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 RSAD2Q8WXG1 361 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 IRGQQ8WZA9 623 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 RAPGEF5Q92565 580 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 PEBP4Q96S96 227 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 HEMGNQ9BXL5 484 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 RAB6CQ9H0N0 254 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 STAP1Q9ULZ2 295 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 YJEFN3A6XGL0 299 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 E7ENQ6 273 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 CCL16O15467 120 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 RAD51CO43502 376 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 HEXIM1O94992 359 aaKnown RBP13.08□□□□□ -0.32
SRSF1-204ENST00000581979 RARAP10276 462 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 TFE3P19532 575 aaPredicted RBP13.08□□□□□ -0.32
SRSF1-204ENST00000581979 CHRNA3P32297 505 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 ROR1Q01973 937 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 HTR4Q13639 388 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 ASTLQ6HA08 431 aaPredicted RBP13.08□□□□□ -0.32
SRSF1-204ENST00000581979 FBXO38Q6PIJ6 1188 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 VSTM1Q6UX27 236 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 STRADAQ7RTN6 431 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 TMEM105Q8N8V8 129 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 PRELID2Q8N945 189 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 KCTD6Q8NC69 237 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 MAGOHBQ96A72 148 aaKnown RBP13.08□□□□□ -0.32
SRSF1-204ENST00000581979 SLC2A13Q96QE2 648 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 TBCBQ99426 244 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 STIM2Q9P246 746 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 WNT16Q9UBV4 365 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 RAB21Q9UL25 225 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 CDH7Q9ULB5 785 aa13.08□□□□□ -0.32
SRSF1-204ENST00000581979 WDR27A2RRH5 827 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 NARSO43776 548 aaKnown RBP13.07□□□□□ -0.32
SRSF1-204ENST00000581979 LTFP02788 710 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 SRFP11831 508 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 KRT10P13645 584 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 ATF2P15336 505 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 H2AFXP16104 143 aaPredicted RBP13.07□□□□□ -0.32
SRSF1-204ENST00000581979 KDELR1P24390 212 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 SLC5A3P53794 718 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 HDAC4P56524 1084 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms