RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 PTPRDP23468 1912 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 CHD9Q3L8U1 2897 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 CFAP69A5D8W1 941 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 NT5C1B-RDH14C9J2C7 533 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 H7C4K7 107 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 TRIM66O15016 1216 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 TP73O15350 636 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 UPP2O95045 317 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 AMPD1P23109 780 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 ARPP19P56211 112 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 IKBKEQ14164 716 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 MRPL58Q14197 206 aaKnown RBP15.17■□□□□ 0.02
MKS1-211ENST00000581761 TTMPQ5BVD1 217 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 BSPRYQ5W0U4 402 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 VSTM1Q6UX27 236 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 CEP128Q6ZU80 1094 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 TRMT10CQ7L0Y3 403 aaKnown RBP15.17■□□□□ 0.02
MKS1-211ENST00000581761 CDKL3Q8IVW4 592 aaPredicted RBP15.17■□□□□ 0.02
MKS1-211ENST00000581761 FAM71DQ8N9W8 422 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 SCAMP5Q8TAC9 235 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 NTAN1Q96AB6 310 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 FUBP3Q96I24 572 aaKnown RBP eCLIP15.17■□□□□ 0.02
MKS1-211ENST00000581761 B3GALT6Q96L58 329 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 C8orf48Q96LL4 319 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 SLC9A7Q96T83 725 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 EPB41L4BQ9H329 900 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 SEMA4AQ9H3S1 761 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 TMBIM4Q9HC24 238 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 DNAJC17Q9NVM6 304 aaKnown RBP15.17■□□□□ 0.02
MKS1-211ENST00000581761 DDIT4Q9NX09 232 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 CWC15Q9P013 229 aaKnown RBP15.17■□□□□ 0.02
MKS1-211ENST00000581761 HEY1Q9Y5J3 304 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 PATJQ8NI35 1801 aa15.17■□□□□ 0.02
MKS1-211ENST00000581761 GOLGA6CA6NDK9 693 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 TNFRSF10BO14763 440 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 F9P00740 461 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 MYZAPP0CAP1 466 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 GOLGA6DP0CG33 693 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 CPB1P15086 417 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 GOT1P17174 413 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 RPL22P35268 128 aaKnown RBP15.16■□□□□ 0.02
MKS1-211ENST00000581761 ADRA1BP35368 520 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 PBX3P40426 434 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 GYS2P54840 703 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 AIF1P55008 147 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 EIF3BP55884 814 aaKnown RBP15.16■□□□□ 0.02
MKS1-211ENST00000581761 YWHAGP61981 247 aaKnown RBP eCLIP15.16■□□□□ 0.02
MKS1-211ENST00000581761 SMAD3P84022 425 aaKnown RBP15.16■□□□□ 0.02
MKS1-211ENST00000581761 ZNF844Q08AG5 666 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 MORF4L2Q15014 288 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 ARL13BQ3SXY8 428 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 SDHAF4Q5VUM1 108 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 BTBD8Q5XKL5 378 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 B4GALNT4Q76KP1 1039 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 PCGF5Q86SE9 256 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 TAC4Q86UU9 113 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 ZCCHC9Q8N567 271 aaKnown RBP15.16■□□□□ 0.02
MKS1-211ENST00000581761 DQX1Q8TE96 717 aaKnown RBP15.16■□□□□ 0.02
MKS1-211ENST00000581761 RNF139Q8WU17 664 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 PGAP3Q96FM1 320 aaPredicted RBP15.16■□□□□ 0.02
MKS1-211ENST00000581761 PGLYRP2Q96PD5 576 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 ADAM7Q9H2U9 754 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 CDC42EP4Q9H3Q1 356 aaKnown RBP15.16■□□□□ 0.02
MKS1-211ENST00000581761 PRDM16Q9HAZ2 1276 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 WDR6Q9NNW5 1121 aaKnown RBP15.16■□□□□ 0.02
MKS1-211ENST00000581761 TMPRSS4Q9NRS4 437 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 GOLGA6AQ9NYA3 693 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.16■□□□□ 0.02
MKS1-211ENST00000581761 EYSQ5T1H1 3165 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 MICAL3Q7RTP6 2002 aa15.16■□□□□ 0.02
MKS1-211ENST00000581761 ZBBXA8MT70 800 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 EEF2KO00418 725 aaKnown RBP15.15■□□□□ 0.02
MKS1-211ENST00000581761 RIPK2O43353 540 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 CREB3O43889 395 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 NUDT17P0C025 328 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 STIP1P31948 543 aaKnown RBP15.15■□□□□ 0.02
MKS1-211ENST00000581761 MAGEA11P43364 429 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 NR2C2P49116 596 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 GPR15P49685 360 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 WDR5P61964 334 aaKnown RBP15.15■□□□□ 0.02
MKS1-211ENST00000581761 DEFB103AP81534 67 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 GBE1Q04446 702 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 SCAPQ12770 1279 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 KRT71Q3SY84 523 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 RNASEH2BQ5TBB1 312 aaKnown RBP15.15■□□□□ 0.02
MKS1-211ENST00000581761 ZNF697Q5TEC3 545 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 NCBP2-AS2Q69YL0 99 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 BEND5Q7L4P6 421 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 TMCO2Q7Z6W1 182 aaPredicted RBP15.15■□□□□ 0.02
MKS1-211ENST00000581761 FAM76AQ8TAV0 307 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 BCL7CQ8WUZ0 217 aaPredicted RBP15.15■□□□□ 0.02
MKS1-211ENST00000581761 PWWP2AQ96N64 755 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 CENPHQ9H3R5 247 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 ARHGEF4Q9NR80 690 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 ABCC13Q9NSE7 274 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 FBXW11Q9UKB1 542 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 SHOC2Q9UQ13 582 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 VWA8A3KMH1 1905 aa15.15■□□□□ 0.02
MKS1-211ENST00000581761 FNDC1Q4ZHG4 1894 aaPredicted RBP15.14■□□□□ 0.01
MKS1-211ENST00000581761 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms