RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 MOGAT3Q86VF5 341 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 ANKRD18AQ8IVF6 992 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 SLC44A2Q8IWA5 706 aaPredicted RBP5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 SIRT6Q8N6T7 355 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 RP9Q8TA86 221 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 RSC1A1Q92681 617 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 CTHRC1Q96CG8 243 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 EVI5LQ96CN4 794 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 MCRS1Q96EZ8 462 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 VPS50Q96JG6 964 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 TRAPPC9Q96Q05 1148 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 EIF3CQ99613 913 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 BRD8Q9H0E9 1235 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 TAF1DQ9H5J8 278 aaPredicted RBP5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 ALG13Q9NP73 1137 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 DUSP22Q9NRW4 184 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 DLL3Q9NYJ7 618 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 MGAT4CQ9UBM8 478 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 ASAP1Q9ULH1 1129 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 DAPP1Q9UN19 280 aa5.38□□□□□ -1.55
SMCHD1-205ENST00000581383 A8MVJ9 347 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 KIF28PB7ZC32 967 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 QSOX1O00391 747 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 IRAK2O43187 625 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 RPP40O75818 363 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 PRKCGP05129 697 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 MCM5P33992 734 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 MAPK9P45984 424 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 SEMA3BQ13214 749 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 TBC1D25Q3MII6 688 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 AASDHQ4L235 1098 aaPredicted RBP5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 PAPD7Q5XG87 772 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 FCRLBQ6BAA4 426 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 CCDC144NLQ6NUI1 221 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 MSANTD2Q6P1R3 559 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 RFX8Q6ZV50 586 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 PRR11Q96HE9 360 aaPredicted RBP5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 ELAC1Q9H777 363 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 SAYSD1Q9NPB0 183 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 KIF17Q9P2E2 1029 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 AMFRQ9UKV5 643 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 PCDHB7Q9Y5E2 793 aa5.37□□□□□ -1.55
SMCHD1-205ENST00000581383 PDE8BO95263 885 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 FAM163BP0C2L3 166 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 ALADP13716 330 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 WT1P19544 449 aaPredicted RBP5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 PAX3P23760 479 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 CST5P28325 142 aaPredicted RBP5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 RGS19P49795 217 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 DIO1P49895 249 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 PRKAA2P54646 552 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 KRTAP10-9P60411 292 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 CUL4BQ13620 913 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 KCNJ12Q14500 433 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 FAM90A2PQ658T7 463 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 NFRKBQ6P4R8 1299 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 PTCHD4Q6ZW05 846 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 RAB11FIP2Q7L804 512 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 KRT27Q7Z3Y8 459 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 WDR53Q7Z5U6 358 aaPredicted RBP5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 CLASRPQ8N2M8 674 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 ABHD11Q8NFV4 315 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 CSGALNACT1Q8TDX6 532 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 RILPL2Q969X0 211 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 C3orf49Q96BT1 292 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 GCC1Q96CN9 775 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 ZSCAN31Q96LW9 406 aaPredicted RBP5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 LENG8Q96PV6 779 aaPredicted RBP5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 DDX23Q9BUQ8 820 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 VPS16Q9H269 839 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 NRIP3Q9NQ35 241 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 SAGE1Q9NXZ1 904 aa5.36□□□□□ -1.55
SMCHD1-205ENST00000581383 ARHGEF17Q96PE2 2063 aaPredicted RBP5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 FAM90A18PA6NE21 464 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 FAM90A16PA6NEW6 464 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 FAM90A9PA6NNJ1 464 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 FAM90A5PA8MXJ8 464 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 B9A039 149 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 H0YIZ8 118 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 CTIFO43310 598 aaKnown RBP5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 TMPRSS11DO60235 418 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 FAM155BO75949 473 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 FAM90A15PP0C7V4 464 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 FAM90A14PP0C7W9 464 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 FPR3P25089 353 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 ADRA1DP25100 572 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 CCT8P50990 548 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 DGKQP52824 942 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 EEFSECP57772 596 aaKnown RBP5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 PSG6Q00889 435 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 SLC10A2Q12908 348 aaPredicted RBP5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 RPS6KA2Q15349 733 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 PCID2Q5JVF3 399 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 ANKRD45Q5TZF3 282 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 TRABD2AQ86V40 505 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 FTSJ3Q8IY81 847 aaKnown RBP5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 NGDNQ8NEJ9 315 aaKnown RBP5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 SLC22A17Q8WUG5 538 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 HMGB4Q8WW32 186 aa5.35□□□□□ -1.55
SMCHD1-205ENST00000581383 MECRQ9BV79 373 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms